Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.15□□□□□ -1.58
Shmt1P50431 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Shmt1P50431 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Shmt1P50431 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.15□□□□□ -1.59
Shmt1P50431 Gm11970-201ENSMUST00000116105 320 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Gm7916-201ENSMUST00000120325 456 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Gm15905-201ENSMUST00000137042 298 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Shmt1P50431 Gm28724-201ENSMUST00000186149 625 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Gm28628-201ENSMUST00000187006 264 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Shmt1P50431 Gm20203-201ENSMUST00000192352 332 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Gm22897-202ENSMUST00000197782 127 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Gm42663-201ENSMUST00000199883 351 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Gm44402-201ENSMUST00000203677 238 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Shmt1P50431 Gm18672-201ENSMUST00000208035 270 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Shmt1P50431 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Shmt1P50431 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.15□□□□□ -1.59
Shmt1P50431 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Shmt1P50431 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Shmt1P50431 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Shmt1P50431 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Shmt1P50431 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Shmt1P50431 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Shmt1P50431 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Shmt1P50431 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Shmt1P50431 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Shmt1P50431 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Shmt1P50431 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Shmt1P50431 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm11313-201ENSMUST00000118779 432 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm12448-201ENSMUST00000118852 655 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm16445-201ENSMUST00000120399 714 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm5646-201ENSMUST00000120568 714 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm15166-201ENSMUST00000120790 385 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm13132-201ENSMUST00000121194 472 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm14766-201ENSMUST00000121689 367 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm14903-201ENSMUST00000122435 537 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm15143-201ENSMUST00000178180 714 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm9892-201ENSMUST00000182415 992 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm28094-201ENSMUST00000185262 390 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm18296-201ENSMUST00000192475 783 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm36953-201ENSMUST00000195295 268 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm9238-201ENSMUST00000196181 329 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm18971-201ENSMUST00000197240 374 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm32536-201ENSMUST00000205209 445 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm45400-201ENSMUST00000211603 653 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.14□□□□□ -1.59
Shmt1P50431 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm4921-201ENSMUST00000219804 992 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm5176-202ENSMUST00000220267 583 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm25147-201ENSMUST00000083030 105 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm23242-201ENSMUST00000083055 107 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm24765-201ENSMUST00000083691 103 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm26108-201ENSMUST00000083973 191 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Shmt1P50431 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.14□□□□□ -1.59
Shmt1P50431 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Shmt1P50431 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Shmt1P50431 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms