Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm14558-201ENSMUST00000117458 381 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm6884-201ENSMUST00000119318 615 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm8545-201ENSMUST00000120692 801 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm16428-201ENSMUST00000121193 723 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm14129-201ENSMUST00000122436 291 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm23332-201ENSMUST00000157424 275 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Rfx1P48377 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Rfx1P48377 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC6.34□□□□□ -1.39
Rfx1P48377 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm6075-201ENSMUST00000186816 486 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm45173-201ENSMUST00000206819 305 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm44571-201ENSMUST00000208092 533 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm18467-201ENSMUST00000208805 434 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm19140-201ENSMUST00000209790 421 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 AC152415.1-201ENSMUST00000213320 440 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC6.34□□□□□ -1.39
Rfx1P48377 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm4012-201ENSMUST00000221504 581 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.34□□□□□ -1.39
Rfx1P48377 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rfx1P48377 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Rfx1P48377 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rfx1P48377 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Rfx1P48377 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rfx1P48377 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Rfx1P48377 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx1P48377 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx1P48377 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rfx1P48377 Gm22370-201ENSMUST00000102422 83 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm24374-201ENSMUST00000104394 106 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm11830-201ENSMUST00000120175 561 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Hba-ps4-201ENSMUST00000128900 447 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm23280-201ENSMUST00000157905 139 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm16557-201ENSMUST00000159182 191 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm27024-201ENSMUST00000182561 755 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rfx1P48377 Gm28283-201ENSMUST00000185509 178 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm37523-201ENSMUST00000194901 412 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm29848-201ENSMUST00000203107 295 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm44239-201ENSMUST00000204228 271 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm44074-201ENSMUST00000204562 337 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.33□□□□□ -1.4
Rfx1P48377 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC6.33□□□□□ -1.4
Rfx1P48377 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 AC115750.1-201ENSMUST00000220441 567 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rfx1P48377 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rfx1P48377 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx1P48377 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rfx1P48377 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 Gm44789-201ENSMUST00000207195 3101 ntBASIC6.33□□□□□ -1.4
Rfx1P48377 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx1P48377 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Rfx1P48377 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 AC125532.1-201ENSMUST00000216210 2334 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rfx1P48377 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Rfx1P48377 Gm25595-201ENSMUST00000102273 97 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rfx1P48377 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rfx1P48377 Gm24235-201ENSMUST00000104319 129 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm4989-201ENSMUST00000118711 749 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm15044-201ENSMUST00000120703 598 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm8761-201ENSMUST00000121507 955 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm14784-201ENSMUST00000121604 663 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.32□□□□□ -1.4
Rfx1P48377 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.32□□□□□ -1.4
Rfx1P48377 Gm22804-201ENSMUST00000158052 101 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm22434-201ENSMUST00000158549 122 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms