Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.66□□□□□ -1.82
Cdx2P43241 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx2P43241 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdx2P43241 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx2P43241 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.65□□□□□ -1.82
Cdx2P43241 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Cdx2P43241 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.65□□□□□ -1.82
Cdx2P43241 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Cdx2P43241 Mir673-201ENSMUST00000102361 91 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.65□□□□□ -1.83
Cdx2P43241 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Gm24561-201ENSMUST00000175182 95 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cdx2P43241 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Gm28967-201ENSMUST00000187351 281 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Gm44694-201ENSMUST00000205317 1298 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Gm45080-201ENSMUST00000206648 283 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdx2P43241 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdx2P43241 Gm18903-201ENSMUST00000215343 480 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdx2P43241 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.65□□□□□ -1.83
Cdx2P43241 AC131100.2-201ENSMUST00000227701 998 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Gm25205-201ENSMUST00000082841 103 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Gm43845-201ENSMUST00000202462 1820 ntBASIC3.65□□□□□ -1.83
Cdx2P43241 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdx2P43241 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdx2P43241 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx2P43241 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.64□□□□□ -1.83
Cdx2P43241 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx2P43241 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm4596-201ENSMUST00000117197 442 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm14975-201ENSMUST00000118741 664 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm16005-201ENSMUST00000120515 269 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm14875-201ENSMUST00000120881 319 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm23602-201ENSMUST00000157258 132 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm23391-201ENSMUST00000157579 104 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm26187-201ENSMUST00000157693 101 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm24014-201ENSMUST00000157728 157 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm25066-201ENSMUST00000158145 123 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm26354-201ENSMUST00000158221 129 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm25535-201ENSMUST00000175364 125 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Gm28186-201ENSMUST00000187447 679 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm39197-201ENSMUST00000212069 457 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm25480-201ENSMUST00000083217 133 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdx2P43241 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.64□□□□□ -1.83
Cdx2P43241 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdx2P43241 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx2P43241 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Cdx2P43241 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdx2P43241 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdx2P43241 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx2P43241 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdx2P43241 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx2P43241 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm15926-201ENSMUST00000120492 550 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm26476-201ENSMUST00000122618 313 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm26028-201ENSMUST00000158660 294 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm25369-201ENSMUST00000158848 132 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm28010-201ENSMUST00000179485 126 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm29576-201ENSMUST00000188020 678 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm28354-201ENSMUST00000190904 678 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm28724-202ENSMUST00000194218 295 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms