Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lire1P11260 Gm22693-201ENSMUST00000175049 442 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Gm25944-201ENSMUST00000178758 94 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Gm25942-201ENSMUST00000180080 110 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Gm4842-201ENSMUST00000183237 835 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Mir6416-201ENSMUST00000183664 117 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Gm27308-201ENSMUST00000184807 233 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.38□□□□□ -1.71
Lire1P11260 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.38□□□□□ -1.71
Lire1P11260 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Lire1P11260 Gm45228-201ENSMUST00000206585 352 ntBASIC4.38□□□□□ -1.71
Lire1P11260 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.38□□□□□ -1.71
Lire1P11260 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.38□□□□□ -1.71
Lire1P11260 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.38□□□□□ -1.71
Lire1P11260 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Gm9818-201ENSMUST00000050900 255 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Lire1P11260 Gm6065-201ENSMUST00000081336 492 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Olfr713-201ENSMUST00000098139 975 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lire1P11260 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.38□□□□□ -1.71
Lire1P11260 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.38□□□□□ -1.71
Lire1P11260 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.38□□□□□ -1.71
Lire1P11260 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lire1P11260 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Lire1P11260 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Lire1P11260 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm14607-201ENSMUST00000119119 491 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm13273-201ENSMUST00000119737 159 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm25103-201ENSMUST00000122671 318 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm23234-201ENSMUST00000157304 134 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm26034-201ENSMUST00000158154 116 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.37□□□□□ -1.71
Lire1P11260 Mir7074-201ENSMUST00000183884 63 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm42516-201ENSMUST00000198691 767 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm45610-201ENSMUST00000209227 784 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm19096-201ENSMUST00000209705 766 ntBASIC4.37□□□□□ -1.71
Lire1P11260 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 Gm45651-201ENSMUST00000210857 335 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lire1P11260 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.37□□□□□ -1.71
Lire1P11260 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lire1P11260 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lire1P11260 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm22868-201ENSMUST00000083955 164 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lire1P11260 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.37□□□□□ -1.71
Lire1P11260 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lire1P11260 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lire1P11260 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Lire1P11260 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Lire1P11260 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 Gm25419-201ENSMUST00000104215 191 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm14575-201ENSMUST00000117210 560 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm8202-201ENSMUST00000117682 310 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm14172-201ENSMUST00000118255 644 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm15168-201ENSMUST00000121057 316 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lire1P11260 Gm4852-201ENSMUST00000121202 729 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.36□□□□□ -1.71
Lire1P11260 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Lire1P11260 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.36□□□□□ -1.71
Lire1P11260 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.36□□□□□ -1.71
Lire1P11260 Gm26085-201ENSMUST00000157900 116 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm23505-201ENSMUST00000158989 130 ntBASIC4.36□□□□□ -1.71
Lire1P11260 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
Lire1P11260 Gm16563-201ENSMUST00000162673 423 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lire1P11260 Gm8161-201ENSMUST00000168739 481 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms