Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm38008-201ENSMUST00000195333 518 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm18747-201ENSMUST00000198129 648 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Mir7682-201ENSMUST00000198467 58 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm7099-201ENSMUST00000080066 554 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm25200-201ENSMUST00000083094 130 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm22868-201ENSMUST00000083955 164 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm24281-201ENSMUST00000104234 136 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm12448-201ENSMUST00000118852 655 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm16327-201ENSMUST00000137146 228 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm23385-201ENSMUST00000158592 295 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm16290-201ENSMUST00000161175 474 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm10067-201ENSMUST00000179462 348 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm29320-201ENSMUST00000185235 615 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm28471-201ENSMUST00000185994 615 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm29179-202ENSMUST00000186138 615 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm29448-201ENSMUST00000186675 615 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm29314-201ENSMUST00000186800 615 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm28253-202ENSMUST00000187971 615 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm28625-201ENSMUST00000188309 205 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm29169-201ENSMUST00000189835 615 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm38283-201ENSMUST00000193041 695 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm37416-201ENSMUST00000193596 318 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm45474-201ENSMUST00000209471 408 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm18193-201ENSMUST00000210017 772 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Chmp6P0C0A3 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.22□□□□□ -1.73
Chmp6P0C0A3 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.21□□□□□ -1.73
Chmp6P0C0A3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Chmp6P0C0A3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.21□□□□□ -1.73
Chmp6P0C0A3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm23424-201ENSMUST00000103889 110 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm13567-201ENSMUST00000118026 247 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm11566-201ENSMUST00000118550 203 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm7219-201ENSMUST00000119619 297 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm13009-201ENSMUST00000121307 267 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm7241-201ENSMUST00000159853 357 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm15143-201ENSMUST00000178180 714 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm8498-201ENSMUST00000188227 974 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm38088-201ENSMUST00000195829 241 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm22897-201ENSMUST00000197860 128 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm17829-201ENSMUST00000219782 344 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.21□□□□□ -1.74
Chmp6P0C0A3 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms