Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC4.73□□□□□ -1.65
Col3a1P08121 Gm3829-201ENSMUST00000222362 619 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 AC144733.1-201ENSMUST00000222893 1289 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 AC108945.1-201ENSMUST00000226477 94 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col3a1P08121 Gm24626-201ENSMUST00000082621 161 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col3a1P08121 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col3a1P08121 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.73□□□□□ -1.65
Col3a1P08121 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.73□□□□□ -1.65
Col3a1P08121 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.73□□□□□ -1.65
Col3a1P08121 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Gm14621-201ENSMUST00000117709 689 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Gm11448-201ENSMUST00000120427 450 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Gm28356-202ENSMUST00000187566 858 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.72□□□□□ -1.65
Col3a1P08121 Gm37104-201ENSMUST00000193278 196 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC4.72□□□□□ -1.65
Col3a1P08121 Gm19366-201ENSMUST00000206996 156 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.72□□□□□ -1.65
Col3a1P08121 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col3a1P08121 Gm8724-201ENSMUST00000081668 483 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Mir350-201ENSMUST00000083639 99 ntBASIC4.72□□□□□ -1.65
Col3a1P08121 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col3a1P08121 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col3a1P08121 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col3a1P08121 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Col3a1P08121 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col3a1P08121 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.71□□□□□ -1.65
Col3a1P08121 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col3a1P08121 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm22472-201ENSMUST00000104115 134 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm15994-201ENSMUST00000118029 402 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Mup-ps14-201ENSMUST00000118437 532 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm13677-201ENSMUST00000120739 595 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.71□□□□□ -1.66
Col3a1P08121 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.71□□□□□ -1.66
Col3a1P08121 Gm22143-201ENSMUST00000157401 203 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm26746-201ENSMUST00000181722 487 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm18403-201ENSMUST00000192907 529 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm8874-201ENSMUST00000196826 286 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col3a1P08121 AC192616.3-201ENSMUST00000220797 1124 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm23736-201ENSMUST00000082553 75 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm22155-201ENSMUST00000083836 162 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col3a1P08121 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col3a1P08121 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col3a1P08121 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Col3a1P08121 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col3a1P08121 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Col3a1P08121 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col3a1P08121 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col3a1P08121 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.71□□□□□ -1.66
Col3a1P08121 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm15361-201ENSMUST00000119320 444 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm23667-201ENSMUST00000157466 120 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Gm25436-201ENSMUST00000158275 145 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Gm24551-201ENSMUST00000158645 92 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col3a1P08121 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm28924-201ENSMUST00000190012 241 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms