Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm17779-201ENSMUST00000213395 394 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 AC091260.1-201ENSMUST00000216112 229 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.41□□□□□ -1.7
Cbx4O55187 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cbx4O55187 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cbx4O55187 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.41□□□□□ -1.7
Cbx4O55187 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cbx4O55187 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
Cbx4O55187 Gm38090-201ENSMUST00000195733 1942 ntBASIC4.4□□□□□ -1.7
Cbx4O55187 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cbx4O55187 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.4□□□□□ -1.7
Cbx4O55187 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cbx4O55187 Gm23014-201ENSMUST00000104144 130 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm12112-201ENSMUST00000117772 231 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm12571-201ENSMUST00000118132 243 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cbx4O55187 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm25665-201ENSMUST00000157695 110 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm24636-201ENSMUST00000158673 288 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm22243-201ENSMUST00000178754 120 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm25942-201ENSMUST00000180080 110 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.4□□□□□ -1.71
Cbx4O55187 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm42958-201ENSMUST00000197595 318 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm42999-201ENSMUST00000198049 786 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm43276-201ENSMUST00000199712 364 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm4714-201ENSMUST00000203395 279 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm44050-201ENSMUST00000204263 527 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cbx4O55187 CT010480.1-201ENSMUST00000223612 363 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 AC131085.1-201ENSMUST00000224746 656 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cbx4O55187 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cbx4O55187 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Cbx4O55187 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cbx4O55187 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Cbx4O55187 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.4□□□□□ -1.71
Cbx4O55187 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cbx4O55187 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cbx4O55187 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Cbx4O55187 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Cbx4O55187 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Cbx4O55187 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Cbx4O55187 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm23948-201ENSMUST00000104030 132 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm15206-201ENSMUST00000119143 454 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm11881-201ENSMUST00000119408 572 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm14534-201ENSMUST00000120045 357 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm16100-201ENSMUST00000120489 231 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm13932-201ENSMUST00000120873 610 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm14303-201ENSMUST00000121320 171 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm25278-201ENSMUST00000157267 120 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm22084-201ENSMUST00000157585 105 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Trbv10-201ENSMUST00000168322 289 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cbx4O55187 Mir7031-201ENSMUST00000183860 65 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm28648-201ENSMUST00000190092 343 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm8599-201ENSMUST00000193033 457 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.39□□□□□ -1.71
Cbx4O55187 Gm7897-201ENSMUST00000193981 554 ntBASIC4.39□□□□□ -1.71
Cbx4O55187 Gm7142-201ENSMUST00000194232 586 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms