Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 CT025689.2-201ENSMUST00000224979 429 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm23256-201ENSMUST00000102235 110 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm26140-201ENSMUST00000103807 110 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Snord65-201ENSMUST00000104269 72 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm12387-201ENSMUST00000118573 955 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm14788-201ENSMUST00000119457 375 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm13808-201ENSMUST00000121353 184 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm26310-201ENSMUST00000157766 117 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm3084-201ENSMUST00000169967 598 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm18604-201ENSMUST00000172535 558 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm22908-201ENSMUST00000177620 110 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm27828-201ENSMUST00000184108 119 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm29596-201ENSMUST00000185710 385 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm29598-201ENSMUST00000188996 588 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm38283-201ENSMUST00000193041 695 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm44757-201ENSMUST00000206373 157 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm44871-201ENSMUST00000207821 497 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Mecom-201ENSMUST00000061088 348 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb3O54879 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hmgb3O54879 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.04□□□□□ -1.92
Hmgb3O54879 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm16128-201ENSMUST00000117855 626 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm14570-201ENSMUST00000119444 391 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm6584-201ENSMUST00000119671 447 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb3O54879 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb3O54879 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm22219-201ENSMUST00000157562 319 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm9027-201ENSMUST00000165914 661 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm17086-201ENSMUST00000171346 484 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm27445-201ENSMUST00000184484 72 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm27564-201ENSMUST00000185196 96 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm18547-201ENSMUST00000192439 811 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC3.03□□□□□ -1.92
Hmgb3O54879 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC3.03□□□□□ -1.92
Hmgb3O54879 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.03□□□□□ -1.92
Hmgb3O54879 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.03□□□□□ -1.92
Hmgb3O54879 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms