Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm14050-201ENSMUST00000117052 346 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm11913-201ENSMUST00000119094 336 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm14887-201ENSMUST00000119522 663 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm14601-201ENSMUST00000120892 236 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm6568-201ENSMUST00000122274 697 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm23171-201ENSMUST00000157159 264 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm26349-201ENSMUST00000157530 130 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm24216-201ENSMUST00000158259 117 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm24939-201ENSMUST00000158325 137 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm23855-201ENSMUST00000158377 135 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm26173-201ENSMUST00000158416 136 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm5929-201ENSMUST00000166883 487 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm18396-201ENSMUST00000177095 361 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm21754-201ENSMUST00000177550 479 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm26983-201ENSMUST00000182051 388 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm28594-201ENSMUST00000187022 661 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm20056-201ENSMUST00000194813 519 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm19936-201ENSMUST00000216414 838 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 AC157017.1-201ENSMUST00000220148 364 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gm36501-201ENSMUST00000221857 745 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Shisa8J3QNX5 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm25919-201ENSMUST00000104271 132 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Mir1188-201ENSMUST00000116756 120 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm13865-201ENSMUST00000120957 865 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm14784-201ENSMUST00000121604 663 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm14162-201ENSMUST00000121985 601 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm22725-201ENSMUST00000158092 110 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm22261-201ENSMUST00000158691 324 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm15974-201ENSMUST00000159103 531 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm25944-201ENSMUST00000178758 94 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm6900-201ENSMUST00000178971 342 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm6113-201ENSMUST00000180319 639 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm8151-201ENSMUST00000184817 871 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm27539-201ENSMUST00000184971 224 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm27355-201ENSMUST00000185045 128 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm27538-201ENSMUST00000185065 294 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm42438-201ENSMUST00000197832 974 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm31230-201ENSMUST00000199725 785 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm43554-201ENSMUST00000199987 186 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm45226-201ENSMUST00000206602 288 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Mir337-201ENSMUST00000083592 97 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms