Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm37504-201ENSMUST00000192537 2374 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm23697-201ENSMUST00000103897 110 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm15387-201ENSMUST00000120421 648 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm13502-201ENSMUST00000121574 684 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Mir3103-201ENSMUST00000175474 67 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm18194-201ENSMUST00000210455 481 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 AC134439.2-201ENSMUST00000221950 467 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a4A2AX52 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a4A2AX52 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm25205-201ENSMUST00000082841 103 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm5518-201ENSMUST00000084171 648 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm23530-201ENSMUST00000104564 137 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm14622-201ENSMUST00000117117 468 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm14975-201ENSMUST00000118741 664 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm11704-201ENSMUST00000120031 214 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm26476-201ENSMUST00000122618 313 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm6058-201ENSMUST00000154261 399 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm16260-201ENSMUST00000155141 304 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm22890-201ENSMUST00000158642 144 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm29484-201ENSMUST00000186067 324 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm18306-201ENSMUST00000207338 569 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm45157-201ENSMUST00000208729 401 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm8724-201ENSMUST00000081668 483 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm20773-201ENSMUST00000178940 681 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm42665-201ENSMUST00000202100 586 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm44927-201ENSMUST00000207573 716 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Gm6171-201ENSMUST00000220760 645 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.04□□□□□ -1.92
Col6a4A2AX52 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col6a4A2AX52 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm6893-201ENSMUST00000118385 522 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm11566-201ENSMUST00000118550 203 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm18359-201ENSMUST00000173024 1459 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm5060-201ENSMUST00000120072 599 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm7308-201ENSMUST00000121087 447 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm24369-201ENSMUST00000175387 96 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm28186-201ENSMUST00000187447 679 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm22043-201ENSMUST00000082993 158 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Mir215-201ENSMUST00000083628 112 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col6a4A2AX52 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.03□□□□□ -1.92
Col6a4A2AX52 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col6a4A2AX52 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms