Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mir7031-201ENSMUST00000183860 65 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm37241-201ENSMUST00000191736 523 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm38061-201ENSMUST00000192490 365 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm38334-201ENSMUST00000195060 313 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm8820-201ENSMUST00000204077 571 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm44972-201ENSMUST00000206419 406 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm19269-201ENSMUST00000211401 804 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.92□□□□□ -1.78
H2afb2S4R1M3 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H2afb2S4R1M3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm23481-201ENSMUST00000104173 131 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm2288-201ENSMUST00000118560 638 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm13831-201ENSMUST00000118764 302 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm11645-201ENSMUST00000121589 649 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm9003-201ENSMUST00000121810 482 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm25386-201ENSMUST00000157814 288 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm16285-201ENSMUST00000162999 347 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Mir6960-201ENSMUST00000183449 61 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm9320-201ENSMUST00000184151 473 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Mir6938-201ENSMUST00000184173 63 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm19280-201ENSMUST00000190191 205 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm4248-201ENSMUST00000196905 316 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm42976-201ENSMUST00000200313 222 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm31532-201ENSMUST00000203555 767 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm8745-201ENSMUST00000207846 782 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm45689-201ENSMUST00000210522 133 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm18039-201ENSMUST00000217816 728 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 BC023105-201ENSMUST00000073997 1227 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm26449-201ENSMUST00000082452 104 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm23623-201ENSMUST00000082461 107 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Mir30e-201ENSMUST00000083475 92 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
H2afb2S4R1M3 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
H2afb2S4R1M3 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
H2afb2S4R1M3 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
H2afb2S4R1M3 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.9□□□□□ -1.78
H2afb2S4R1M3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
H2afb2S4R1M3 Gm23133-201ENSMUST00000104255 135 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm24855-201ENSMUST00000104848 97 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm9432-201ENSMUST00000117810 759 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm11718-201ENSMUST00000119942 537 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm24014-201ENSMUST00000157728 157 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm28094-201ENSMUST00000185262 390 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm8641-201ENSMUST00000186995 826 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.9□□□□□ -1.79
H2afb2S4R1M3 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm37708-201ENSMUST00000192337 895 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm37710-201ENSMUST00000193501 1274 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm44615-201ENSMUST00000206548 358 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Gm45317-201ENSMUST00000210385 223 ntBASIC3.9□□□□□ -1.79
H2afb2S4R1M3 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms