Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm26449-201ENSMUST00000082452 104 ntBASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cpsf1Q9EPU4 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm12276-201ENSMUST00000121709 301 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm25456-201ENSMUST00000157952 109 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm28314-201ENSMUST00000191276 345 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm5829-201ENSMUST00000191383 351 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm42832-201ENSMUST00000196361 745 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm25630-201ENSMUST00000084000 162 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Cpsf1Q9EPU4 Gm11913-201ENSMUST00000119094 336 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm9775-201ENSMUST00000189402 331 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm18403-201ENSMUST00000192907 529 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm43892-201ENSMUST00000204373 265 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm45420-201ENSMUST00000211243 425 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm8473-201ENSMUST00000176697 1885 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm15180-201ENSMUST00000117745 492 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm11830-201ENSMUST00000120175 561 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Mir6938-201ENSMUST00000184173 63 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Mir7062-201ENSMUST00000185038 66 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm9722-201ENSMUST00000194568 802 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm37575-201ENSMUST00000195467 309 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 AL772397.1-201ENSMUST00000216707 606 ntBASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Cpsf1Q9EPU4 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm23175-201ENSMUST00000104371 132 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm25835-201ENSMUST00000158917 144 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Mir6715-201ENSMUST00000184990 57 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm38234-201ENSMUST00000195204 421 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm19104-201ENSMUST00000198392 679 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm45080-201ENSMUST00000206648 283 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Gm22739-201ENSMUST00000083437 160 ntBASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cpsf1Q9EPU4 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm12467-201ENSMUST00000117625 745 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm28614-201ENSMUST00000186483 458 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm37104-201ENSMUST00000193278 196 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms