Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm12564-201ENSMUST00000119860 321 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm8774-201ENSMUST00000203621 692 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm25200-201ENSMUST00000083094 130 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm25764-201ENSMUST00000104092 134 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm15268-201ENSMUST00000118845 352 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm11718-201ENSMUST00000119942 537 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm14716-201ENSMUST00000120138 718 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm12288-201ENSMUST00000121054 1282 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm13852-201ENSMUST00000122350 242 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm24380-201ENSMUST00000122696 324 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm26187-201ENSMUST00000157693 101 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm23385-201ENSMUST00000158592 295 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm8023-201ENSMUST00000195298 903 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm29704-201ENSMUST00000196011 253 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm44099-201ENSMUST00000203299 112 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm44294-201ENSMUST00000205090 728 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm45226-201ENSMUST00000206602 288 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm44611-201ENSMUST00000207507 355 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm45553-201ENSMUST00000209929 507 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Snora7a-201ENSMUST00000082629 140 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm22868-201ENSMUST00000083955 164 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc3Q9D6Y1 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm44624-201ENSMUST00000208700 2278 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Mir147-201ENSMUST00000102354 79 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm25765-201ENSMUST00000104100 132 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm11673-201ENSMUST00000117846 331 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm15994-201ENSMUST00000118029 402 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm11982-201ENSMUST00000121480 314 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm22480-201ENSMUST00000122568 128 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm24382-201ENSMUST00000122698 107 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm22840-201ENSMUST00000158444 136 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm37603-201ENSMUST00000192368 219 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm38080-201ENSMUST00000194035 268 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm8745-201ENSMUST00000207846 782 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm6240-201ENSMUST00000208014 473 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.79□□□□□ -1.8
Ccdc3Q9D6Y1 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms