Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.88□□□□□ -1.63
Clrn1Q8K445 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Clrn1Q8K445 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.88□□□□□ -1.63
Clrn1Q8K445 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm43025-201ENSMUST00000201764 1886 ntBASIC4.88□□□□□ -1.63
Clrn1Q8K445 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Clrn1Q8K445 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm22195-201ENSMUST00000116861 108 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm7657-201ENSMUST00000118851 666 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm14601-201ENSMUST00000120892 236 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm14362-201ENSMUST00000121679 273 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm15254-201ENSMUST00000149567 273 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm22819-201ENSMUST00000157445 303 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm24965-201ENSMUST00000157922 106 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm27849-201ENSMUST00000183673 125 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm27588-201ENSMUST00000185096 263 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm37272-201ENSMUST00000193401 488 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm5551-201ENSMUST00000199720 690 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm43472-201ENSMUST00000200175 154 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm45048-201ENSMUST00000207058 429 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm5750-201ENSMUST00000218711 801 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm24622-201ENSMUST00000082619 162 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm23459-201ENSMUST00000083259 131 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm26163-201ENSMUST00000083792 178 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.87□□□□□ -1.63
Clrn1Q8K445 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clrn1Q8K445 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm24170-201ENSMUST00000104124 133 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm14670-201ENSMUST00000117327 337 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm13311-201ENSMUST00000117863 379 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm14927-201ENSMUST00000120283 454 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm14392-201ENSMUST00000120332 401 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm13537-201ENSMUST00000120467 267 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm11805-201ENSMUST00000121238 600 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm5699-201ENSMUST00000152491 723 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm23250-201ENSMUST00000157444 267 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm23179-201ENSMUST00000158693 304 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Mir6971-201ENSMUST00000183497 63 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm28146-201ENSMUST00000185517 701 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms