Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 CT030166.1-201ENSMUST00000222654 357 ntBASIC4.87□□□□□ -1.63
Nup88Q8CEC0 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.87□□□□□ -1.63
Nup88Q8CEC0 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.87□□□□□ -1.63
Nup88Q8CEC0 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.87□□□□□ -1.63
Nup88Q8CEC0 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.87□□□□□ -1.63
Nup88Q8CEC0 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.87□□□□□ -1.63
Nup88Q8CEC0 Gm22575-201ENSMUST00000082981 110 ntBASIC4.87□□□□□ -1.63
Nup88Q8CEC0 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Nup88Q8CEC0 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Nup88Q8CEC0 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup88Q8CEC0 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup88Q8CEC0 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup88Q8CEC0 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nup88Q8CEC0 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm13664-201ENSMUST00000117304 345 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm13677-201ENSMUST00000120739 595 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm22986-201ENSMUST00000122753 130 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm22156-201ENSMUST00000158409 141 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm37219-201ENSMUST00000192036 926 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm8939-201ENSMUST00000192577 964 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm8790-201ENSMUST00000194108 322 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm37002-201ENSMUST00000194560 373 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Nup88Q8CEC0 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm14163-201ENSMUST00000117342 217 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm13973-201ENSMUST00000121371 894 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm22816-201ENSMUST00000157450 117 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm24690-201ENSMUST00000157759 97 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm25224-201ENSMUST00000158195 68 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm44554-201ENSMUST00000208738 147 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.85□□□□□ -1.63
Nup88Q8CEC0 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm14655-201ENSMUST00000120124 578 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm12587-201ENSMUST00000120180 427 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm12486-201ENSMUST00000120887 541 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm17109-201ENSMUST00000163985 358 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm17075-201ENSMUST00000171924 670 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms