Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm20399-201ENSMUST00000174652 132 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm26746-201ENSMUST00000181722 487 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Mir6899-201ENSMUST00000184798 64 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm44869-201ENSMUST00000208836 357 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm5518-201ENSMUST00000084171 648 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trub1Q8C0D0 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm22758-201ENSMUST00000102275 96 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm11869-201ENSMUST00000118701 329 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm26362-201ENSMUST00000158865 315 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm29356-201ENSMUST00000186935 373 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm42926-201ENSMUST00000200496 697 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Gm37114-201ENSMUST00000195065 1804 ntBASIC3.79□□□□□ -1.8
Trub1Q8C0D0 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm15785-201ENSMUST00000119145 694 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm23112-201ENSMUST00000158606 125 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm29408-201ENSMUST00000187536 216 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm36994-201ENSMUST00000192941 492 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm44475-201ENSMUST00000204041 424 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Snord15a-201ENSMUST00000083888 148 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm25099-201ENSMUST00000093716 116 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Trub1Q8C0D0 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm13737-201ENSMUST00000119793 232 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Snord92-201ENSMUST00000175548 85 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm27834-201ENSMUST00000183427 125 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Mir6933-201ENSMUST00000184982 81 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm37343-201ENSMUST00000192542 111 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.77□□□□□ -1.81
Trub1Q8C0D0 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms