Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp40Q8BWR4 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.42□□□□□ -1.38
Usp40Q8BWR4 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.42□□□□□ -1.38
Usp40Q8BWR4 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Usp40Q8BWR4 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Usp40Q8BWR4 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp40Q8BWR4 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC6.42□□□□□ -1.38
Usp40Q8BWR4 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Usp40Q8BWR4 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm25647-201ENSMUST00000101832 78 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm25823-201ENSMUST00000101995 78 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm22771-201ENSMUST00000104449 91 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Mir879-201ENSMUST00000104703 76 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm14887-201ENSMUST00000119522 663 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm14678-201ENSMUST00000121396 482 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm22480-201ENSMUST00000122568 128 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm22311-201ENSMUST00000158006 110 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm24220-201ENSMUST00000177753 79 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm25988-201ENSMUST00000177759 79 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm23471-201ENSMUST00000177886 79 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm21815-201ENSMUST00000178213 664 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm26488-201ENSMUST00000178225 79 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm23449-201ENSMUST00000179208 79 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm25221-201ENSMUST00000180051 79 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm9892-201ENSMUST00000182415 992 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm26993-201ENSMUST00000182766 789 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm29259-201ENSMUST00000186396 694 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm28615-201ENSMUST00000187527 482 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm20561-201ENSMUST00000188131 292 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm28625-201ENSMUST00000188309 205 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm18900-201ENSMUST00000193218 584 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm5284-201ENSMUST00000199053 903 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm45081-201ENSMUST00000206281 572 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 AC116460.1-201ENSMUST00000219040 313 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm23464-201ENSMUST00000083145 147 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm6177-201ENSMUST00000085589 465 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm42843-201ENSMUST00000196328 3616 ntBASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp40Q8BWR4 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Mir761-201ENSMUST00000103245 76 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm9427-201ENSMUST00000116187 651 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm12245-201ENSMUST00000117266 357 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Amd-ps1-201ENSMUST00000120127 994 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm24592-201ENSMUST00000122505 106 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm3757-201ENSMUST00000125878 675 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm23435-201ENSMUST00000157183 156 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm23229-201ENSMUST00000157297 105 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm25427-201ENSMUST00000157605 103 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm17060-201ENSMUST00000172394 824 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm24417-201ENSMUST00000178123 79 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm24653-201ENSMUST00000178541 79 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm25934-201ENSMUST00000178642 79 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm23003-201ENSMUST00000179948 107 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm27414-201ENSMUST00000185033 381 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm27919-201ENSMUST00000185163 107 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm28149-201ENSMUST00000187102 378 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm28768-201ENSMUST00000189034 378 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms