Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 AC154692.1-201ENSMUST00000228314 544 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 Gm23815-201ENSMUST00000083231 107 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 Gm24319-201ENSMUST00000083389 107 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Nup54Q8BTS4 Gm23520-201ENSMUST00000093736 107 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Nup54Q8BTS4 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.16□□□□□ -1.74
Nup54Q8BTS4 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Nup54Q8BTS4 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
Nup54Q8BTS4 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Nup54Q8BTS4 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Nup54Q8BTS4 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm24318-201ENSMUST00000104490 131 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm15313-201ENSMUST00000119179 282 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm23228-201ENSMUST00000157296 270 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm3030-201ENSMUST00000163410 516 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm3339-201ENSMUST00000163462 475 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm22859-201ENSMUST00000174978 122 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm26219-201ENSMUST00000175216 71 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm25999-201ENSMUST00000175398 133 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm38061-201ENSMUST00000192490 365 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm43531-201ENSMUST00000200676 1114 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm45523-201ENSMUST00000210712 799 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm18016-201ENSMUST00000216119 801 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Platr25-208ENSMUST00000222602 939 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm8724-201ENSMUST00000081668 483 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm26165-201ENSMUST00000083791 138 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nup54Q8BTS4 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm23424-201ENSMUST00000103889 110 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm10552-201ENSMUST00000113396 372 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm11719-201ENSMUST00000119399 351 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm26320-201ENSMUST00000157742 306 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm22789-201ENSMUST00000157884 130 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm23781-201ENSMUST00000157940 308 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm24850-201ENSMUST00000158029 119 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm26362-201ENSMUST00000158865 315 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Mir3104-201ENSMUST00000174911 63 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm17967-201ENSMUST00000195319 647 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Snord21-201ENSMUST00000082519 94 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Mir346-201ENSMUST00000083547 98 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.14□□□□□ -1.75
Nup54Q8BTS4 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Nup54Q8BTS4 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms