Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Mir92b-201ENSMUST00000102300 83 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm15161-201ENSMUST00000117340 387 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm9432-201ENSMUST00000117810 759 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm12328-201ENSMUST00000118611 197 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm15385-201ENSMUST00000118725 667 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm8200-201ENSMUST00000122390 222 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm22312-201ENSMUST00000158005 130 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm26460-201ENSMUST00000175061 126 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Mir3473c-201ENSMUST00000175262 81 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Mir6938-201ENSMUST00000184173 63 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm27286-201ENSMUST00000184934 179 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm28920-201ENSMUST00000189957 699 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm42526-201ENSMUST00000198956 393 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm44765-201ENSMUST00000206927 601 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm45458-201ENSMUST00000209900 522 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm7639-201ENSMUST00000212608 484 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Mir134-201ENSMUST00000083492 71 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.39□□□□□ -1.71
Ccdc40Q8BI79 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm26019-201ENSMUST00000104407 119 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm14933-201ENSMUST00000118840 481 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm14916-201ENSMUST00000121904 204 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm22156-201ENSMUST00000158409 141 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm25655-201ENSMUST00000158465 290 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm8604-201ENSMUST00000183150 965 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm19726-201ENSMUST00000205008 240 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm44946-201ENSMUST00000208425 572 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc40Q8BI79 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Gm12982-201ENSMUST00000117408 190 ntBASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Gm15382-201ENSMUST00000118011 537 ntBASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 Gm11262-201ENSMUST00000119326 833 ntBASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc40Q8BI79 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms