Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm13000-201ENSMUST00000120937 496 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm14473-201ENSMUST00000122269 557 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm25177-201ENSMUST00000122634 117 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm11281-201ENSMUST00000141391 576 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm23960-201ENSMUST00000157206 131 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm16285-201ENSMUST00000162999 347 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm19807-201ENSMUST00000173971 667 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm5974-201ENSMUST00000181607 986 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Mir6963-201ENSMUST00000183535 71 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Mir6996-201ENSMUST00000183922 61 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Mir6391-201ENSMUST00000184391 104 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm18855-201ENSMUST00000206689 570 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm26203-201ENSMUST00000082911 114 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Atg4bQ8BGE6 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm11673-201ENSMUST00000117846 331 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm12372-201ENSMUST00000121654 768 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm16471-201ENSMUST00000121940 618 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm12885-201ENSMUST00000122246 328 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm22726-201ENSMUST00000158089 179 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm22637-201ENSMUST00000158144 283 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm4222-201ENSMUST00000165784 470 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm27715-201ENSMUST00000184714 260 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm28872-201ENSMUST00000191518 158 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm44521-201ENSMUST00000206469 217 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Gm25147-201ENSMUST00000083030 105 ntBASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Atg4bQ8BGE6 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
Atg4bQ8BGE6 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.84□□□□□ -1.8
Atg4bQ8BGE6 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Atg4bQ8BGE6 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Atg4bQ8BGE6 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Gm15151-201ENSMUST00000117106 177 ntBASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Gm15785-201ENSMUST00000119145 694 ntBASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Gm25713-201ENSMUST00000158625 109 ntBASIC3.83□□□□□ -1.8
Atg4bQ8BGE6 Gm16563-201ENSMUST00000162673 423 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms