Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Scaf4Q6PFF0 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm23739-201ENSMUST00000102295 108 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm26396-201ENSMUST00000104093 132 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm15333-201ENSMUST00000118825 364 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm12448-201ENSMUST00000118852 655 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm14046-201ENSMUST00000119389 509 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm8545-201ENSMUST00000120692 801 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm15044-201ENSMUST00000120703 598 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm25387-201ENSMUST00000157813 132 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm24810-201ENSMUST00000175317 70 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm20673-201ENSMUST00000177167 430 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm18467-201ENSMUST00000208805 434 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm22365-201ENSMUST00000093750 117 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.23□□□□□ -1.57
Scaf4Q6PFF0 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm13331-201ENSMUST00000117500 448 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm4989-201ENSMUST00000118711 749 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm11313-201ENSMUST00000118779 432 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm25292-201ENSMUST00000122797 322 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm26410-201ENSMUST00000157670 261 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm23280-201ENSMUST00000157905 139 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm23774-201ENSMUST00000158990 131 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Mir5106-201ENSMUST00000174936 73 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm22951-201ENSMUST00000179471 107 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm22621-201ENSMUST00000179678 74 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm37177-201ENSMUST00000193768 417 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm5551-201ENSMUST00000199720 690 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm45485-201ENSMUST00000211229 357 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm45422-201ENSMUST00000211476 246 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 Gm35558-203ENSMUST00000222264 204 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.22□□□□□ -1.57
Scaf4Q6PFF0 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms