Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm45539-201ENSMUST00000210313 428 ntBASIC3.73□□□□□ -1.81
Vsx2Q61412 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.73□□□□□ -1.81
Vsx2Q61412 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.73□□□□□ -1.81
Vsx2Q61412 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Vsx2Q61412 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.73□□□□□ -1.81
Vsx2Q61412 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Vsx2Q61412 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Vsx2Q61412 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Vsx2Q61412 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Vsx2Q61412 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Vsx2Q61412 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.73□□□□□ -1.81
Vsx2Q61412 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Vsx2Q61412 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm13607-201ENSMUST00000117875 539 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm14885-201ENSMUST00000117969 496 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm12401-201ENSMUST00000118435 228 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm13973-201ENSMUST00000121371 894 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm11692-201ENSMUST00000122121 902 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm22519-201ENSMUST00000158270 178 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm23112-201ENSMUST00000158606 125 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm23198-201ENSMUST00000158811 91 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm2389-201ENSMUST00000160487 189 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm2862-201ENSMUST00000161524 328 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm42453-201ENSMUST00000200477 409 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Gm45162-201ENSMUST00000209013 618 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.72□□□□□ -1.81
Vsx2Q61412 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.72□□□□□ -1.81
Vsx2Q61412 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.72□□□□□ -1.81
Vsx2Q61412 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Vsx2Q61412 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Vsx2Q61412 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Vsx2Q61412 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Vsx2Q61412 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Vsx2Q61412 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Vsx2Q61412 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Vsx2Q61412 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.71□□□□□ -1.81
Vsx2Q61412 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.71□□□□□ -1.81
Vsx2Q61412 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Vsx2Q61412 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm22988-201ENSMUST00000122759 144 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm22226-201ENSMUST00000157355 109 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm24961-201ENSMUST00000157918 184 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm26171-201ENSMUST00000158422 131 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm23816-201ENSMUST00000179617 132 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm28920-201ENSMUST00000189957 699 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm44099-201ENSMUST00000203299 112 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm4501-201ENSMUST00000207330 551 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm4558-201ENSMUST00000207886 521 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm6240-201ENSMUST00000208014 473 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm44845-201ENSMUST00000208773 335 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm3690-201ENSMUST00000211341 262 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm18899-201ENSMUST00000217663 546 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm19181-201ENSMUST00000218891 940 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm23518-201ENSMUST00000082835 153 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm23443-201ENSMUST00000082916 128 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm45322-201ENSMUST00000211642 1361 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.71□□□□□ -1.82
Vsx2Q61412 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vsx2Q61412 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vsx2Q61412 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.7□□□□□ -1.82
Vsx2Q61412 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Vsx2Q61412 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Vsx2Q61412 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Vsx2Q61412 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.7□□□□□ -1.82
Vsx2Q61412 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms