Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim58Q5NCC9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm12873-201ENSMUST00000119988 422 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm11830-201ENSMUST00000120175 561 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm24244-201ENSMUST00000157317 130 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm22816-201ENSMUST00000157450 117 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm26028-201ENSMUST00000158660 294 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Mir713-201ENSMUST00000178651 108 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm2314-201ENSMUST00000200391 586 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Gm40598-201ENSMUST00000222953 547 ntBASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim58Q5NCC9 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm11510-201ENSMUST00000120278 347 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm24059-201ENSMUST00000157493 312 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm23257-201ENSMUST00000158322 132 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm22890-201ENSMUST00000158642 144 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm22531-201ENSMUST00000158819 140 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm23365-201ENSMUST00000175019 125 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm25960-201ENSMUST00000175110 125 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm44453-201ENSMUST00000175161 126 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm25195-201ENSMUST00000177656 126 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm28060-201ENSMUST00000191554 189 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm7449-201ENSMUST00000194393 663 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm42453-201ENSMUST00000200477 409 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm20946-201ENSMUST00000212367 461 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm35857-201ENSMUST00000212739 178 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim58Q5NCC9 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.72□□□□□ -1.65
Trim58Q5NCC9 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.71□□□□□ -1.65
Trim58Q5NCC9 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Trim58Q5NCC9 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.71□□□□□ -1.65
Trim58Q5NCC9 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gm5757-201ENSMUST00000117494 528 ntBASIC4.71□□□□□ -1.66
Trim58Q5NCC9 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gm45078-201ENSMUST00000205343 546 ntBASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim58Q5NCC9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms