Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm44513-201ENSMUST00000206811 439 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Mir17-201ENSMUST00000083574 84 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm5518-201ENSMUST00000084171 648 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm16261-201ENSMUST00000096813 205 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm6043-201ENSMUST00000099961 492 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm37926-201ENSMUST00000191922 2424 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Gm37943-201ENSMUST00000194053 3944 ntBASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim41Q5NCC3 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm42510-201ENSMUST00000196470 2258 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm12328-201ENSMUST00000118611 197 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm4989-201ENSMUST00000118711 749 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm27834-201ENSMUST00000183427 125 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm27855-201ENSMUST00000184122 128 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm28263-201ENSMUST00000185884 400 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm43436-201ENSMUST00000199308 147 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm8132-201ENSMUST00000204938 640 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm45209-201ENSMUST00000207122 353 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm44938-201ENSMUST00000208614 427 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 AC159297.1-201ENSMUST00000218689 290 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm37023-201ENSMUST00000192895 2426 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Gm8980-201ENSMUST00000140232 2197 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trim41Q5NCC3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC10.04□□□□□ -0.8
Trim41Q5NCC3 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 AC102847.2-201ENSMUST00000227799 2906 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 AC122263.1-201ENSMUST00000228636 2805 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm44248-201ENSMUST00000203079 1549 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm15267-201ENSMUST00000120888 464 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm24692-201ENSMUST00000157761 146 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm17109-201ENSMUST00000163985 358 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm20523-201ENSMUST00000174340 1124 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Mir7074-201ENSMUST00000183884 63 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Rnu3a-202ENSMUST00000196710 213 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Gm45413-201ENSMUST00000210389 3538 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 AC171206.2-201ENSMUST00000215252 389 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Rnu3a-201ENSMUST00000083936 214 ntBASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trim41Q5NCC3 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trim41Q5NCC3 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trim41Q5NCC3 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trim41Q5NCC3 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trim41Q5NCC3 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm14756-201ENSMUST00000116395 240 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm5699-201ENSMUST00000152491 723 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Mir1946b-201ENSMUST00000157853 133 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm24735-201ENSMUST00000158859 118 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm26430-201ENSMUST00000178054 107 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm29475-201ENSMUST00000190767 312 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm38185-201ENSMUST00000193195 694 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms