Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm26165-201ENSMUST00000083791 138 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trafd1Q3UDK1 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.96□□□□□ -1.77
Trafd1Q3UDK1 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.96□□□□□ -1.77
Trafd1Q3UDK1 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.96□□□□□ -1.77
Trafd1Q3UDK1 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Trafd1Q3UDK1 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.96□□□□□ -1.77
Trafd1Q3UDK1 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Trafd1Q3UDK1 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Snora64-201ENSMUST00000104521 134 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm12427-201ENSMUST00000117719 302 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm11350-201ENSMUST00000121436 870 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm15274-201ENSMUST00000131442 291 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm21979-201ENSMUST00000139887 291 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm15259-201ENSMUST00000151262 291 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm22378-201ENSMUST00000157481 111 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm23591-201ENSMUST00000157663 286 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm23554-201ENSMUST00000157818 110 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm26036-201ENSMUST00000158149 144 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm19427-201ENSMUST00000183619 208 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm7449-201ENSMUST00000194393 663 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm44354-201ENSMUST00000196017 143 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm18944-201ENSMUST00000207672 643 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm6230-201ENSMUST00000208077 780 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm44845-201ENSMUST00000208773 335 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Mir34b-201ENSMUST00000083558 84 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trafd1Q3UDK1 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm13902-201ENSMUST00000120168 605 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm13973-201ENSMUST00000121371 894 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm26487-201ENSMUST00000158022 94 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm25224-201ENSMUST00000158195 68 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm25713-201ENSMUST00000158625 109 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm27760-201ENSMUST00000185048 114 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm38201-201ENSMUST00000192143 387 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm38088-201ENSMUST00000195829 241 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm42539-201ENSMUST00000197009 308 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm44403-201ENSMUST00000198554 129 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms