Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm13803-201ENSMUST00000117547 489 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm11409-201ENSMUST00000118621 403 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm13603-201ENSMUST00000119404 83 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.17□□□□□ -1.58
Shmt1P50431 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm23032-201ENSMUST00000157995 107 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm23318-201ENSMUST00000158000 108 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm22733-201ENSMUST00000158094 91 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm21959-201ENSMUST00000178439 452 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm26950-201ENSMUST00000182734 498 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.17□□□□□ -1.58
Shmt1P50431 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm3189-201ENSMUST00000205595 832 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm44648-201ENSMUST00000208267 329 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm45316-201ENSMUST00000210128 162 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Shmt1P50431 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm25475-201ENSMUST00000082825 180 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Mir421-201ENSMUST00000083575 76 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Shmt1P50431 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Shmt1P50431 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Shmt1P50431 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.17□□□□□ -1.58
Shmt1P50431 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Shmt1P50431 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Shmt1P50431 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Shmt1P50431 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm12268-201ENSMUST00000118398 442 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm12717-201ENSMUST00000118427 983 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm14982-201ENSMUST00000121102 442 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm12332-201ENSMUST00000121397 922 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm7840-201ENSMUST00000122086 533 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm7870-201ENSMUST00000184467 616 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm37501-201ENSMUST00000192830 691 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm37095-201ENSMUST00000195421 205 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Shmt1P50431 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm44754-201ENSMUST00000208155 400 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.16□□□□□ -1.58
Shmt1P50431 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm6171-201ENSMUST00000220760 645 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm4263-202ENSMUST00000221392 667 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.16□□□□□ -1.58
Shmt1P50431 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Snora52-201ENSMUST00000082732 137 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Shmt1P50431 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Shmt1P50431 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.16□□□□□ -1.58
Shmt1P50431 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Shmt1P50431 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Shmt1P50431 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
Shmt1P50431 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Shmt1P50431 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Shmt1P50431 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Shmt1P50431 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Shmt1P50431 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms