Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm15331-201ENSMUST00000120225 385 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm12618-201ENSMUST00000121754 483 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm26402-201ENSMUST00000158499 113 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Mir3112-201ENSMUST00000175431 82 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm22411-201ENSMUST00000175462 126 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm22002-201ENSMUST00000175622 125 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm22852-201ENSMUST00000177899 101 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm27030-201ENSMUST00000182551 464 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm27754-201ENSMUST00000183340 126 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Mir6361-201ENSMUST00000185079 101 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm36983-201ENSMUST00000192280 1102 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm43043-201ENSMUST00000196579 412 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 AC125531.1-201ENSMUST00000219849 221 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm18696-201ENSMUST00000220103 274 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm7822-201ENSMUST00000222433 581 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 AC154600.1-201ENSMUST00000226480 714 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Rfx1P48377 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Rfx1P48377 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm37652-201ENSMUST00000195290 2095 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 AC122317.3-201ENSMUST00000219320 3524 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 Gm43283-201ENSMUST00000199138 2548 ntBASIC6.36□□□□□ -1.39
Rfx1P48377 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Rfx1P48377 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Gm37718-201ENSMUST00000191655 2631 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 Mir292-201ENSMUST00000104847 82 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm14670-201ENSMUST00000117327 337 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm14669-201ENSMUST00000118841 250 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm4853-201ENSMUST00000119359 394 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm14240-201ENSMUST00000120353 546 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm11852-201ENSMUST00000120806 222 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm24635-201ENSMUST00000122712 128 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm23211-201ENSMUST00000122717 308 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm23995-201ENSMUST00000158060 129 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm26169-201ENSMUST00000158420 135 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.35□□□□□ -1.39
Rfx1P48377 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm20657-201ENSMUST00000177079 515 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm22851-201ENSMUST00000178741 94 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm25074-201ENSMUST00000178782 94 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm8649-201ENSMUST00000181799 233 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Mir7072-201ENSMUST00000184542 60 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 Gm18177-201ENSMUST00000188373 404 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm44307-201ENSMUST00000204466 764 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm4083-201ENSMUST00000207158 451 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Gm8231-201ENSMUST00000221617 783 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 CT025602.1-201ENSMUST00000227281 382 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Rfx1P48377 Gm22572-201ENSMUST00000082985 105 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Mir143-201ENSMUST00000083511 63 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.35□□□□□ -1.39
Rfx1P48377 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Rfx1P48377 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Rfx1P48377 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Rfx1P48377 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Rfx1P48377 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rfx1P48377 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Rfx1P48377 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rfx1P48377 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rfx1P48377 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Rfx1P48377 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Rfx1P48377 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms