Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Traf1P39428 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Traf1P39428 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Traf1P39428 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Traf1P39428 Gm10552-201ENSMUST00000113396 372 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm6565-201ENSMUST00000121217 438 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm22453-201ENSMUST00000122801 318 ntBASIC4.93□□□□□ -1.62
Traf1P39428 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Traf1P39428 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.93□□□□□ -1.62
Traf1P39428 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Traf1P39428 Gm23385-201ENSMUST00000158592 295 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm26028-201ENSMUST00000158660 294 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm2389-201ENSMUST00000160487 189 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm15795-201ENSMUST00000160969 553 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Traf1P39428 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm29513-201ENSMUST00000185741 202 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.93□□□□□ -1.62
Traf1P39428 Gm5309-201ENSMUST00000197416 677 ntBASIC4.93□□□□□ -1.62
Traf1P39428 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.93□□□□□ -1.62
Traf1P39428 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.93□□□□□ -1.62
Traf1P39428 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.93□□□□□ -1.62
Traf1P39428 Gm17780-201ENSMUST00000207142 612 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Traf1P39428 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Traf1P39428 Gm2059-201ENSMUST00000212025 287 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Traf1P39428 Gm7530-201ENSMUST00000218466 605 ntBASIC4.93□□□□□ -1.62
Traf1P39428 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Traf1P39428 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Gm6361-201ENSMUST00000091031 435 ntBASIC4.93□□□□□ -1.62
Traf1P39428 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.93□□□□□ -1.62
Traf1P39428 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Traf1P39428 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Traf1P39428 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm24715-201ENSMUST00000102377 95 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm12173-201ENSMUST00000117622 273 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm13785-201ENSMUST00000119099 690 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm7421-201ENSMUST00000119298 639 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm7365-201ENSMUST00000120877 639 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Traf1P39428 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm17075-201ENSMUST00000171924 670 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm24417-201ENSMUST00000178123 79 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm24653-201ENSMUST00000178541 79 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm25934-201ENSMUST00000178642 79 ntBASIC4.92□□□□□ -1.62
Traf1P39428 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Traf1P39428 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm7449-201ENSMUST00000194393 663 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm44354-201ENSMUST00000196017 143 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm42566-201ENSMUST00000197120 643 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm43441-201ENSMUST00000201458 205 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm44023-201ENSMUST00000203710 469 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm44088-201ENSMUST00000204595 237 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm44857-201ENSMUST00000208331 196 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm45727-201ENSMUST00000212886 572 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Gm18377-201ENSMUST00000215141 607 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.92□□□□□ -1.62
Traf1P39428 Platr25-208ENSMUST00000222602 939 ntBASIC4.92□□□□□ -1.62
Traf1P39428 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.92□□□□□ -1.62
Traf1P39428 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Mir202-201ENSMUST00000083568 72 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Traf1P39428 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Traf1P39428 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.92□□□□□ -1.62
Traf1P39428 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Traf1P39428 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.92□□□□□ -1.62
Traf1P39428 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Traf1P39428 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Traf1P39428 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Traf1P39428 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.91□□□□□ -1.62
Traf1P39428 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Traf1P39428 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm23319-201ENSMUST00000104467 131 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm22488-201ENSMUST00000116811 127 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm12564-201ENSMUST00000119860 321 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm23587-201ENSMUST00000157658 84 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm26362-201ENSMUST00000158865 315 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm3191-201ENSMUST00000167139 346 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm28263-201ENSMUST00000185884 400 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.91□□□□□ -1.62
Traf1P39428 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms