Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.62□□□□□ -1.83
P20040 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
P20040 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
P20040 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
P20040 Gm22493-201ENSMUST00000104494 132 ntBASIC3.62□□□□□ -1.83
P20040 Gm13478-201ENSMUST00000118312 413 ntBASIC3.62□□□□□ -1.83
P20040 Gm13501-201ENSMUST00000118477 979 ntBASIC3.62□□□□□ -1.83
P20040 Gm12190-201ENSMUST00000120001 187 ntBASIC3.62□□□□□ -1.83
P20040 Gm3835-201ENSMUST00000120752 403 ntBASIC3.62□□□□□ -1.83
P20040 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.62□□□□□ -1.83
P20040 Gm14559-201ENSMUST00000121745 496 ntBASIC3.62□□□□□ -1.83
P20040 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.62□□□□□ -1.83
P20040 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.62□□□□□ -1.83
P20040 Gm16250-201ENSMUST00000148974 256 ntBASIC3.62□□□□□ -1.83
P20040 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Gm25606-201ENSMUST00000158363 95 ntBASIC3.62□□□□□ -1.83
P20040 Gm22156-201ENSMUST00000158409 141 ntBASIC3.62□□□□□ -1.83
P20040 Gm16490-201ENSMUST00000165299 351 ntBASIC3.62□□□□□ -1.83
P20040 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.62□□□□□ -1.83
P20040 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.62□□□□□ -1.83
P20040 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Gm28920-201ENSMUST00000189957 699 ntBASIC3.62□□□□□ -1.83
P20040 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.62□□□□□ -1.83
P20040 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.62□□□□□ -1.83
P20040 Ighv10-4-201ENSMUST00000193702 299 ntBASIC3.62□□□□□ -1.83
P20040 Gm38234-201ENSMUST00000195204 421 ntBASIC3.62□□□□□ -1.83
P20040 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.62□□□□□ -1.83
P20040 Gm44023-201ENSMUST00000203710 469 ntBASIC3.62□□□□□ -1.83
P20040 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
P20040 Gm45735-201ENSMUST00000212779 319 ntBASIC3.62□□□□□ -1.83
P20040 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.62□□□□□ -1.83
P20040 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.62□□□□□ -1.83
P20040 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.62□□□□□ -1.83
P20040 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.62□□□□□ -1.83
P20040 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.62□□□□□ -1.83
P20040 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.62□□□□□ -1.83
P20040 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
P20040 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
P20040 Mir27a-201ENSMUST00000083510 87 ntBASIC3.62□□□□□ -1.83
P20040 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.62□□□□□ -1.83
P20040 Gm22444-201ENSMUST00000093693 108 ntBASIC3.62□□□□□ -1.83
P20040 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
P20040 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
P20040 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
P20040 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.62□□□□□ -1.83
P20040 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
P20040 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.62□□□□□ -1.83
P20040 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
P20040 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
P20040 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
P20040 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
P20040 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
P20040 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.61□□□□□ -1.83
P20040 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.61□□□□□ -1.83
P20040 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Gm23481-201ENSMUST00000104173 131 ntBASIC3.61□□□□□ -1.83
P20040 Gm24788-201ENSMUST00000104283 156 ntBASIC3.61□□□□□ -1.83
P20040 Snora64-201ENSMUST00000104521 134 ntBASIC3.61□□□□□ -1.83
P20040 Gm15075-201ENSMUST00000122187 477 ntBASIC3.61□□□□□ -1.83
P20040 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.61□□□□□ -1.83
P20040 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.61□□□□□ -1.83
P20040 Gm23231-201ENSMUST00000157299 104 ntBASIC3.61□□□□□ -1.83
P20040 Gm24002-201ENSMUST00000158456 104 ntBASIC3.61□□□□□ -1.83
P20040 Gm17109-201ENSMUST00000163985 358 ntBASIC3.61□□□□□ -1.83
P20040 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
P20040 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
P20040 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
P20040 Mir6414-201ENSMUST00000183685 82 ntBASIC3.61□□□□□ -1.83
P20040 Mir6537-201ENSMUST00000184150 110 ntBASIC3.61□□□□□ -1.83
P20040 Gm29428-201ENSMUST00000190086 409 ntBASIC3.61□□□□□ -1.83
P20040 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.61□□□□□ -1.83
P20040 Gm38270-201ENSMUST00000192721 407 ntBASIC3.61□□□□□ -1.83
P20040 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.61□□□□□ -1.83
P20040 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.61□□□□□ -1.83
P20040 Mir7682-201ENSMUST00000198467 58 ntBASIC3.61□□□□□ -1.83
P20040 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.61□□□□□ -1.83
P20040 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.61□□□□□ -1.83
P20040 Gm4045-201ENSMUST00000204076 310 ntBASIC3.61□□□□□ -1.83
P20040 Gm44371-201ENSMUST00000204148 467 ntBASIC3.61□□□□□ -1.83
P20040 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
P20040 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Gm7530-201ENSMUST00000218466 605 ntBASIC3.61□□□□□ -1.83
P20040 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.61□□□□□ -1.83
P20040 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
P20040 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms