Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm3348-201ENSMUST00000177813 850 ntBASIC5.95□□□□□ -1.46
RaraP11416 Mir7235-201ENSMUST00000183796 56 ntBASIC5.95□□□□□ -1.46
RaraP11416 Mir6412-201ENSMUST00000184477 97 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.95□□□□□ -1.46
RaraP11416 Gm7266-201ENSMUST00000187999 405 ntBASIC5.95□□□□□ -1.46
RaraP11416 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.95□□□□□ -1.46
RaraP11416 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Gm44655-201ENSMUST00000207768 423 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.95□□□□□ -1.46
RaraP11416 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RaraP11416 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.95□□□□□ -1.46
RaraP11416 AC115289.1-201ENSMUST00000224915 522 ntBASIC5.95□□□□□ -1.46
RaraP11416 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RaraP11416 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Gm22684-201ENSMUST00000082849 132 ntBASIC5.95□□□□□ -1.46
RaraP11416 Mir143-201ENSMUST00000083511 63 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm24763-201ENSMUST00000083688 190 ntBASIC5.95□□□□□ -1.46
RaraP11416 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Olfr203-201ENSMUST00000089305 924 ntBASIC5.95□□□□□ -1.46
RaraP11416 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RaraP11416 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RaraP11416 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.95□□□□□ -1.46
RaraP11416 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.95□□□□□ -1.46
RaraP11416 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RaraP11416 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RaraP11416 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.95□□□□□ -1.46
RaraP11416 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.94□□□□□ -1.46
RaraP11416 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Gm22370-201ENSMUST00000102422 83 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm22374-201ENSMUST00000104583 132 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm22372-201ENSMUST00000104589 136 ntBASIC5.94□□□□□ -1.46
RaraP11416 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm13439-201ENSMUST00000117541 409 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm11346-201ENSMUST00000118346 704 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm14731-201ENSMUST00000119216 376 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm14831-201ENSMUST00000120253 409 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm6591-201ENSMUST00000121063 434 ntBASIC5.94□□□□□ -1.46
RaraP11416 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
RaraP11416 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Gm24059-201ENSMUST00000157493 312 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm25184-201ENSMUST00000157753 163 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm23280-201ENSMUST00000157905 139 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm25048-201ENSMUST00000158598 91 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm3470-201ENSMUST00000160819 420 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm22655-201ENSMUST00000174949 96 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RaraP11416 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Gm27781-201ENSMUST00000185185 92 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm21735-201ENSMUST00000190360 696 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm43723-201ENSMUST00000196886 189 ntBASIC5.94□□□□□ -1.46
RaraP11416 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm43039-201ENSMUST00000202883 963 ntBASIC5.94□□□□□ -1.46
RaraP11416 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.94□□□□□ -1.46
RaraP11416 Gm43919-201ENSMUST00000204303 364 ntBASIC5.94□□□□□ -1.46
RaraP11416 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
RaraP11416 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.94□□□□□ -1.46
RaraP11416 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.94□□□□□ -1.46
RaraP11416 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.94□□□□□ -1.46
RaraP11416 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.94□□□□□ -1.46
RaraP11416 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RaraP11416 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RaraP11416 Gm22423-201ENSMUST00000082861 184 ntBASIC5.94□□□□□ -1.46
RaraP11416 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.94□□□□□ -1.46
RaraP11416 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RaraP11416 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RaraP11416 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RaraP11416 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.93□□□□□ -1.46
RaraP11416 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.93□□□□□ -1.46
RaraP11416 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RaraP11416 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RaraP11416 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RaraP11416 Gm13428-201ENSMUST00000117540 365 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms