Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm8703-201ENSMUST00000203793 730 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm44371-201ENSMUST00000204148 467 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm22423-201ENSMUST00000082861 184 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Mir370-201ENSMUST00000083499 79 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Chmp6P0C0A3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm26387-201ENSMUST00000104238 132 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm12387-201ENSMUST00000118573 955 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm13737-201ENSMUST00000119793 232 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm11931-201ENSMUST00000121630 447 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm23231-201ENSMUST00000157299 104 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm24850-201ENSMUST00000158029 119 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm3030-201ENSMUST00000163410 516 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm3339-201ENSMUST00000163462 475 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm19774-201ENSMUST00000190667 114 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm43559-201ENSMUST00000198755 466 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm17887-201ENSMUST00000200194 547 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm44972-201ENSMUST00000206419 406 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm2059-201ENSMUST00000212025 287 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Chmp6P0C0A3 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm22758-201ENSMUST00000102275 96 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm15926-201ENSMUST00000120492 550 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm26371-201ENSMUST00000157829 104 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm21816-201ENSMUST00000179255 360 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm8748-201ENSMUST00000211125 587 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.24□□□□□ -1.73
Chmp6P0C0A3 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Chmp6P0C0A3 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm14786-201ENSMUST00000117127 944 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm14816-201ENSMUST00000117174 294 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm11718-201ENSMUST00000119942 537 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm11403-201ENSMUST00000122195 369 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm5924-201ENSMUST00000132554 871 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm18522-201ENSMUST00000173947 650 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm27315-201ENSMUST00000183977 154 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm8296-201ENSMUST00000185597 524 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm29588-201ENSMUST00000185738 298 ntBASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.23□□□□□ -1.73
Chmp6P0C0A3 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms