Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Mir1960-201ENSMUST00000157488 78 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm23120-201ENSMUST00000157654 287 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm24191-201ENSMUST00000157977 122 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm16232-201ENSMUST00000162856 167 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm26585-201ENSMUST00000180890 630 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Scgb2b33-201ENSMUST00000187413 334 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm28534-201ENSMUST00000187744 676 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm37817-201ENSMUST00000195276 434 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.95□□□□□ -1.62
Hoxd3P09027 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Igkv4-73-201ENSMUST00000199760 358 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm2602-201ENSMUST00000202112 571 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 AC126685.1-201ENSMUST00000221001 121 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Vaultrc5-201ENSMUST00000083211 143 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm8074-201ENSMUST00000095071 252 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm8700-201ENSMUST00000222187 3054 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Gm45297-201ENSMUST00000209893 3483 ntBASIC4.95□□□□□ -1.62
Hoxd3P09027 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hoxd3P09027 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm45457-201ENSMUST00000209931 3089 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm44735-201ENSMUST00000206197 1752 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm22103-201ENSMUST00000116733 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm26475-201ENSMUST00000116769 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm23620-201ENSMUST00000116812 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm25042-201ENSMUST00000116856 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm25540-201ENSMUST00000116880 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm15016-201ENSMUST00000117300 720 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm12509-201ENSMUST00000118033 609 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm12311-201ENSMUST00000118803 374 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm8430-201ENSMUST00000119780 471 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm16016-201ENSMUST00000120831 550 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm8317-201ENSMUST00000121261 471 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm11849-201ENSMUST00000121293 261 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm5809-201ENSMUST00000121854 529 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC4.94□□□□□ -1.62
Hoxd3P09027 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm25666-201ENSMUST00000157702 107 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm23386-201ENSMUST00000158585 144 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm23550-201ENSMUST00000179003 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm25123-201ENSMUST00000179154 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm25353-201ENSMUST00000179366 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm22992-201ENSMUST00000179496 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm25892-201ENSMUST00000179867 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm24092-201ENSMUST00000180257 121 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Mir6337-201ENSMUST00000184194 105 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm27997-201ENSMUST00000184942 69 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm28860-201ENSMUST00000188103 313 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm43214-201ENSMUST00000199242 352 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm43561-201ENSMUST00000199866 448 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm43233-201ENSMUST00000200491 616 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm30694-201ENSMUST00000209278 1230 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm2645-201ENSMUST00000223516 547 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 AC159979.1-201ENSMUST00000227927 342 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms