Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 AC154506.3-201ENSMUST00000225417 213 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cbx4O55187 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
Cbx4O55187 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cbx4O55187 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.43□□□□□ -1.7
Cbx4O55187 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
Cbx4O55187 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cbx4O55187 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm12760-201ENSMUST00000117861 482 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm14238-201ENSMUST00000120227 323 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm15157-201ENSMUST00000121852 702 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm22478-201ENSMUST00000122570 154 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.42□□□□□ -1.7
Cbx4O55187 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm27165-201ENSMUST00000183951 232 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm9320-201ENSMUST00000184151 473 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Mir6410-201ENSMUST00000184204 104 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm17953-201ENSMUST00000192061 667 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC4.42□□□□□ -1.7
Cbx4O55187 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm44404-201ENSMUST00000203979 636 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm44879-201ENSMUST00000207007 503 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Gm18306-201ENSMUST00000207338 569 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cbx4O55187 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm17915-201ENSMUST00000222077 548 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 AC167192.1-201ENSMUST00000225908 139 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cbx4O55187 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cbx4O55187 Olfr881-201ENSMUST00000074611 948 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm10916-201ENSMUST00000080330 483 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cbx4O55187 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cbx4O55187 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.42□□□□□ -1.7
Cbx4O55187 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cbx4O55187 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cbx4O55187 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
Cbx4O55187 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cbx4O55187 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm14050-201ENSMUST00000117052 346 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm12328-201ENSMUST00000118611 197 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm11252-201ENSMUST00000120572 939 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm13745-201ENSMUST00000121994 527 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.41□□□□□ -1.7
Cbx4O55187 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.41□□□□□ -1.7
Cbx4O55187 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm26349-201ENSMUST00000157530 130 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm15974-201ENSMUST00000159103 531 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm16545-201ENSMUST00000161968 463 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm5258-201ENSMUST00000165437 327 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm29073-201ENSMUST00000185563 664 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm21856-201ENSMUST00000187547 696 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm28956-201ENSMUST00000189047 427 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm21735-201ENSMUST00000190360 696 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm29165-201ENSMUST00000190655 664 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm29211-201ENSMUST00000191470 664 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm36382-201ENSMUST00000198892 541 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm17956-201ENSMUST00000199931 838 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm43384-201ENSMUST00000200569 637 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm6051-201ENSMUST00000201529 352 ntBASIC4.41□□□□□ -1.7
Cbx4O55187 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.41□□□□□ -1.7
Cbx4O55187 Gm45392-201ENSMUST00000210441 214 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms