Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb3O54879 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.07□□□□□ -1.92
Hmgb3O54879 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm24544-201ENSMUST00000103862 110 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm12788-201ENSMUST00000119090 308 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm13852-201ENSMUST00000122350 242 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm24014-201ENSMUST00000157728 157 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm17153-201ENSMUST00000171314 490 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm24811-201ENSMUST00000175313 100 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm28654-201ENSMUST00000189801 379 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm37072-201ENSMUST00000194570 837 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm43415-201ENSMUST00000201934 750 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm2926-201ENSMUST00000205625 239 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm7407-201ENSMUST00000208301 568 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm45778-201ENSMUST00000211959 153 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm18921-201ENSMUST00000221798 366 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC3.06□□□□□ -1.92
Hmgb3O54879 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Hmgb3O54879 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm24319-201ENSMUST00000083389 107 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Mir370-201ENSMUST00000083499 79 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm22826-201ENSMUST00000083774 165 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.06□□□□□ -1.92
Hmgb3O54879 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.06□□□□□ -1.92
Hmgb3O54879 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm336-201ENSMUST00000186376 1480 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm23319-201ENSMUST00000104467 131 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm11874-201ENSMUST00000117437 130 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm6058-201ENSMUST00000154261 399 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm24930-201ENSMUST00000158315 83 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm16571-201ENSMUST00000159112 291 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm5527-201ENSMUST00000179821 642 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm27733-201ENSMUST00000184803 68 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm28594-201ENSMUST00000187022 661 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm37603-201ENSMUST00000192368 219 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm38046-201ENSMUST00000192733 550 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm7182-201ENSMUST00000193351 732 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm37167-201ENSMUST00000194946 396 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm42451-201ENSMUST00000197410 244 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm43814-201ENSMUST00000197851 413 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm6051-201ENSMUST00000201529 352 ntBASIC3.05□□□□□ -1.92
Hmgb3O54879 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms