Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm12106-201ENSMUST00000116006 1200 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm15785-201ENSMUST00000119145 694 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm25177-201ENSMUST00000122634 117 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm23228-201ENSMUST00000157296 270 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm3189-201ENSMUST00000205595 832 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Srp54bE9PXC0 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm24788-201ENSMUST00000104283 156 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm14554-201ENSMUST00000119548 661 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm14881-201ENSMUST00000120366 372 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm14122-201ENSMUST00000122076 973 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm8200-201ENSMUST00000122390 222 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm16545-201ENSMUST00000161968 463 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm22693-201ENSMUST00000175049 442 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm21809-201ENSMUST00000178495 468 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm17412-201ENSMUST00000179261 468 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm27899-201ENSMUST00000184715 64 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm37002-201ENSMUST00000194560 373 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm44354-201ENSMUST00000196017 143 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm18340-201ENSMUST00000196342 609 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm19599-201ENSMUST00000218898 358 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 BC023105-201ENSMUST00000073997 1227 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm26165-201ENSMUST00000083791 138 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Srp54bE9PXC0 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Gm15018-201ENSMUST00000117090 633 ntBASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Gm12173-201ENSMUST00000117622 273 ntBASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Gm11344-201ENSMUST00000122011 335 ntBASIC4.22□□□□□ -1.73
Srp54bE9PXC0 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.22□□□□□ -1.73
Srp54bE9PXC0 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms