Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm9157-201ENSMUST00000117673 225 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm26373-201ENSMUST00000157833 103 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm20693-201ENSMUST00000177431 211 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm43308-201ENSMUST00000197236 373 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Svet1-201ENSMUST00000209370 3940 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm23747-201ENSMUST00000104228 131 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm9119-201ENSMUST00000118866 495 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm13557-201ENSMUST00000120771 382 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm12358-201ENSMUST00000121842 520 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm16566-201ENSMUST00000160387 910 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm18597-201ENSMUST00000209519 694 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Gm25630-201ENSMUST00000084000 162 ntBASIC3.08□□□□□ -1.92
Col6a4A2AX52 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col6a4A2AX52 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm12311-201ENSMUST00000118803 374 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm15466-201ENSMUST00000122299 333 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm17953-201ENSMUST00000192061 667 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm45409-201ENSMUST00000211486 252 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm45344-201ENSMUST00000211610 341 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm46233-201ENSMUST00000217831 449 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm8681-201ENSMUST00000219115 618 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm37911-201ENSMUST00000193099 1545 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm22750-201ENSMUST00000102076 103 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm5762-201ENSMUST00000119204 258 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm22968-201ENSMUST00000157955 118 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm44084-201ENSMUST00000203947 409 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm44594-201ENSMUST00000208982 407 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Gm2710-201ENSMUST00000073196 603 ntBASIC3.07□□□□□ -1.92
Col6a4A2AX52 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Col6a4A2AX52 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a4A2AX52 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm18954-201ENSMUST00000222200 1792 ntBASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm24936-201ENSMUST00000122598 247 ntBASIC3.06□□□□□ -1.92
Col6a4A2AX52 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm24550-201ENSMUST00000158648 279 ntBASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm5983-201ENSMUST00000197739 770 ntBASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm19596-201ENSMUST00000203685 739 ntBASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm44690-201ENSMUST00000207984 382 ntBASIC3.06□□□□□ -1.92
Col6a4A2AX52 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.06□□□□□ -1.92
Col6a4A2AX52 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a4A2AX52 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm25295-201ENSMUST00000122794 306 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm28113-201ENSMUST00000188280 229 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Gm43932-201ENSMUST00000204499 52 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.05□□□□□ -1.92
Col6a4A2AX52 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a4A2AX52 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms