Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm22115-201ENSMUST00000103976 133 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm23923-201ENSMUST00000104108 133 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm13650-201ENSMUST00000117729 433 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm12276-201ENSMUST00000121709 301 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm22310-201ENSMUST00000157509 116 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm27592-201ENSMUST00000157729 126 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm22174-201ENSMUST00000175050 125 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm22692-201ENSMUST00000175055 125 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm27634-201ENSMUST00000175060 126 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm26460-201ENSMUST00000175061 126 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm22460-201ENSMUST00000175269 124 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm25535-201ENSMUST00000175364 125 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm24365-201ENSMUST00000175384 125 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm44310-201ENSMUST00000175424 126 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm22639-201ENSMUST00000175591 125 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm24979-201ENSMUST00000178626 126 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm27743-201ENSMUST00000185136 126 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm19086-201ENSMUST00000190772 665 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm37104-201ENSMUST00000193278 196 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm38088-201ENSMUST00000195829 241 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm44927-201ENSMUST00000207573 716 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Gm9765-201ENSMUST00000043170 321 ntBASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Scn3aA2ASI5 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm24380-201ENSMUST00000122696 324 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm22034-201ENSMUST00000157283 134 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm23591-201ENSMUST00000157663 286 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm24008-201ENSMUST00000157733 138 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr192-201ENSMUST00000080251 925 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Mir101b-201ENSMUST00000083622 97 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm10161-201ENSMUST00000091506 204 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Mir673-201ENSMUST00000102361 91 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm13076-201ENSMUST00000118041 204 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm26020-201ENSMUST00000122729 183 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm26226-201ENSMUST00000082509 116 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Scn3aA2ASI5 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Scn3aA2ASI5 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm22590-201ENSMUST00000104247 128 ntBASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm15377-201ENSMUST00000119594 246 ntBASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm8502-201ENSMUST00000185708 901 ntBASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm21147-201ENSMUST00000186046 913 ntBASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.06□□□□□ -1.76
Scn3aA2ASI5 Gm42990-201ENSMUST00000199231 312 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms