Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm5762-201ENSMUST00000119204 258 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm12897-201ENSMUST00000120341 250 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm13865-201ENSMUST00000120957 865 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm22380-201ENSMUST00000157479 95 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Mir7682-201ENSMUST00000198467 58 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm8319-201ENSMUST00000205708 641 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.8□□□□□ -1.8
Scn1aA2APX8 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Scn1aA2APX8 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm14975-201ENSMUST00000118741 664 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm13118-201ENSMUST00000120402 549 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm15014-201ENSMUST00000120742 258 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm24314-201ENSMUST00000158274 123 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Mir6938-201ENSMUST00000184173 63 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm27760-201ENSMUST00000185048 114 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm7041-201ENSMUST00000201227 524 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm44869-201ENSMUST00000208836 357 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.79□□□□□ -1.8
Scn1aA2APX8 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn1aA2APX8 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm42905-201ENSMUST00000196237 1611 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm26145-201ENSMUST00000104476 127 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm25727-201ENSMUST00000104522 131 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm15074-201ENSMUST00000117603 936 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm11829-201ENSMUST00000121003 282 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm37575-201ENSMUST00000195467 309 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm18672-201ENSMUST00000208035 270 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 AC123658.1-201ENSMUST00000228364 867 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm14912-201ENSMUST00000120166 1773 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm18189-201ENSMUST00000218153 1951 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm43010-201ENSMUST00000195993 2878 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm11830-201ENSMUST00000120175 561 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm27160-201ENSMUST00000184837 199 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Scn1aA2APX8 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm45080-201ENSMUST00000206648 283 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm39147-201ENSMUST00000211376 465 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 AC139294.1-201ENSMUST00000226708 571 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Gm7117-201ENSMUST00000071515 387 ntBASIC3.78□□□□□ -1.8
Scn1aA2APX8 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scn1aA2APX8 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
Scn1aA2APX8 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
Scn1aA2APX8 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Gm13024-201ENSMUST00000121756 718 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Gm16327-201ENSMUST00000137146 228 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Gm23773-201ENSMUST00000158985 296 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Gm17711-201ENSMUST00000172028 237 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 Gm44690-201ENSMUST00000207984 382 ntBASIC3.77□□□□□ -1.81
Scn1aA2APX8 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Scn1aA2APX8 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms