Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Snord22-201ENSMUST00000083153 126 ntBASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim3Q9R1R2 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm15120-201ENSMUST00000120602 301 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm12226-201ENSMUST00000144172 876 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Mir6960-201ENSMUST00000183449 61 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm28011-201ENSMUST00000184097 175 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm36964-201ENSMUST00000191876 198 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm5309-201ENSMUST00000197416 677 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm8774-201ENSMUST00000203621 692 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm18462-201ENSMUST00000208112 417 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm6303-201ENSMUST00000210123 471 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm18043-201ENSMUST00000216741 739 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm19599-201ENSMUST00000218898 358 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Diaph3-206ENSMUST00000226745 713 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Trim3Q9R1R2 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm22676-201ENSMUST00000116972 129 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm11432-201ENSMUST00000117334 231 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm12190-201ENSMUST00000120001 187 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm12884-201ENSMUST00000120371 325 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm13788-201ENSMUST00000120767 601 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm14589-201ENSMUST00000121640 727 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm8200-201ENSMUST00000122390 222 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm22211-201ENSMUST00000158097 156 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm25898-201ENSMUST00000158303 106 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm18406-201ENSMUST00000185872 669 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm29479-201ENSMUST00000190352 455 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm44023-201ENSMUST00000203710 469 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm44765-201ENSMUST00000206927 601 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.92□□□□□ -1.78
Trim3Q9R1R2 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm22868-201ENSMUST00000083955 164 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.92□□□□□ -1.78
Trim3Q9R1R2 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Gm25647-201ENSMUST00000101832 78 ntBASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Gm25823-201ENSMUST00000101995 78 ntBASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Snord66-201ENSMUST00000104051 75 ntBASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Gm9432-201ENSMUST00000117810 759 ntBASIC3.91□□□□□ -1.78
Trim3Q9R1R2 Gm12392-201ENSMUST00000118014 938 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms