Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm14810-201ENSMUST00000121628 486 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm15171-201ENSMUST00000122191 334 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm22106-201ENSMUST00000122544 127 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm6058-201ENSMUST00000154261 399 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm26036-201ENSMUST00000158149 144 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm23583-201ENSMUST00000158533 289 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm2862-201ENSMUST00000161524 328 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm28467-201ENSMUST00000190981 318 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm45651-201ENSMUST00000210857 335 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm8264-201ENSMUST00000217801 465 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm8158-201ENSMUST00000219220 465 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm8112-201ENSMUST00000219637 465 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Gm40692-201ENSMUST00000220411 491 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 CR974429.1-201ENSMUST00000220877 827 ntBASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Smco4Q9JIS3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm15206-201ENSMUST00000119143 454 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm11931-201ENSMUST00000121630 447 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm22698-201ENSMUST00000175375 108 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm20693-201ENSMUST00000177431 211 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Mir6414-201ENSMUST00000183685 82 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm28304-201ENSMUST00000185977 312 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm8282-201ENSMUST00000187559 483 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm28923-201ENSMUST00000187755 322 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm29598-201ENSMUST00000188996 588 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm29256-201ENSMUST00000189094 312 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm28484-201ENSMUST00000190606 312 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm8745-201ENSMUST00000207846 782 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm8748-201ENSMUST00000211125 587 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm18510-201ENSMUST00000219335 1096 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Smco4Q9JIS3 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Mir1946b-201ENSMUST00000157853 133 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm16557-201ENSMUST00000159182 191 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm17981-201ENSMUST00000191109 739 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm37632-201ENSMUST00000191811 1142 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm43712-201ENSMUST00000198020 291 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm43424-201ENSMUST00000200484 253 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm19096-201ENSMUST00000209705 766 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Smco4Q9JIS3 AC166343.1-201ENSMUST00000213261 577 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 AC110816.1-201ENSMUST00000218559 980 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 Gm19181-201ENSMUST00000218891 940 ntBASIC2.81□□□□□ -1.96
Smco4Q9JIS3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms