Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Lima1Q9ERG0 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm14977-201ENSMUST00000121626 812 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm12358-201ENSMUST00000121842 520 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm24014-201ENSMUST00000157728 157 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm22211-201ENSMUST00000158097 156 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm25713-201ENSMUST00000158625 109 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm6486-201ENSMUST00000166202 434 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm22398-201ENSMUST00000174941 125 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm25731-201ENSMUST00000175167 125 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm30280-201ENSMUST00000192214 262 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm18547-201ENSMUST00000192439 811 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm44354-201ENSMUST00000196017 143 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm42451-201ENSMUST00000197410 244 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm45209-201ENSMUST00000207122 353 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm24950-201ENSMUST00000082768 191 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm23971-201ENSMUST00000083317 191 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Mir34b-201ENSMUST00000083558 84 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm23849-201ENSMUST00000083833 191 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Gm26316-201ENSMUST00000083886 191 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lima1Q9ERG0 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.79□□□□□ -1.8
Lima1Q9ERG0 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm14541-201ENSMUST00000118985 157 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm7421-201ENSMUST00000119298 639 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm12252-201ENSMUST00000119517 219 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm13677-201ENSMUST00000120739 595 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm13557-201ENSMUST00000120771 382 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm7365-201ENSMUST00000120877 639 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm14559-201ENSMUST00000121745 496 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Mir5134-201ENSMUST00000175529 78 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm8641-201ENSMUST00000186995 826 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.78□□□□□ -1.8
Lima1Q9ERG0 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm14885-201ENSMUST00000117969 496 ntBASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm11746-201ENSMUST00000119843 821 ntBASIC3.77□□□□□ -1.81
Lima1Q9ERG0 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm27976-201ENSMUST00000183635 162 ntBASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Mir7031-201ENSMUST00000183860 65 ntBASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.77□□□□□ -1.81
Lima1Q9ERG0 Gm43440-201ENSMUST00000201957 729 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms