Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm25913-201ENSMUST00000157617 135 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm22637-201ENSMUST00000158144 283 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Mir1947-201ENSMUST00000158235 85 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm25534-201ENSMUST00000175365 125 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm20701-201ENSMUST00000176082 347 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm28304-201ENSMUST00000185977 312 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm8282-201ENSMUST00000187559 483 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm29256-201ENSMUST00000189094 312 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm28484-201ENSMUST00000190606 312 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm44354-201ENSMUST00000196017 143 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm8556-201ENSMUST00000210437 664 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm45434-201ENSMUST00000210550 293 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 CR974592.1-201ENSMUST00000220422 574 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 AF357341-201ENSMUST00000083088 75 ntBASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hmgn3Q9DCB1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm11387-201ENSMUST00000120266 772 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm15480-201ENSMUST00000120442 519 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm4852-201ENSMUST00000121202 729 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm7855-201ENSMUST00000137737 687 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm23023-201ENSMUST00000158767 109 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Mir5134-201ENSMUST00000175529 78 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm27315-201ENSMUST00000183977 154 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm28195-201ENSMUST00000186992 372 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm43853-201ENSMUST00000197162 301 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 AC122035.2-201ENSMUST00000228698 462 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm10212-201ENSMUST00000087884 324 ntBASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hmgn3Q9DCB1 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm15313-201ENSMUST00000119179 282 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm12994-201ENSMUST00000119601 447 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm12739-201ENSMUST00000119769 382 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm12005-201ENSMUST00000121451 379 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm18486-201ENSMUST00000184040 298 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm28967-201ENSMUST00000187351 281 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm8790-201ENSMUST00000194108 322 ntBASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Hmgn3Q9DCB1 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms