Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.68□□□□□ -1.66
Smc1aQ9CU62 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Snora64-201ENSMUST00000104521 134 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm12719-201ENSMUST00000118859 241 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm11625-201ENSMUST00000119535 296 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm5384-201ENSMUST00000120313 463 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm13460-201ENSMUST00000121274 353 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm13973-201ENSMUST00000121371 894 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm23228-201ENSMUST00000157296 270 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm22816-201ENSMUST00000157450 117 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm28471-201ENSMUST00000185994 615 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm28598-201ENSMUST00000186490 615 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm29268-201ENSMUST00000188669 615 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm29218-205ENSMUST00000190846 615 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm28978-201ENSMUST00000191120 615 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm37172-201ENSMUST00000191926 615 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm38330-201ENSMUST00000192743 959 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Mir1892-201ENSMUST00000197752 80 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm45031-201ENSMUST00000206800 288 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm5649-201ENSMUST00000217918 951 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm26165-201ENSMUST00000083791 138 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Smc1aQ9CU62 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.67□□□□□ -1.66
Smc1aQ9CU62 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm14623-201ENSMUST00000121398 603 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm16490-201ENSMUST00000165299 351 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm20673-201ENSMUST00000177167 430 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm21960-201ENSMUST00000181924 452 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Mir6537-201ENSMUST00000184150 110 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm29011-201ENSMUST00000191059 712 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm18877-201ENSMUST00000207706 539 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm24144-201ENSMUST00000082632 111 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm25810-201ENSMUST00000082752 108 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Gm26064-201ENSMUST00000083381 109 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Smc1aQ9CU62 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Smc1aQ9CU62 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Smc1aQ9CU62 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Smc1aQ9CU62 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.65□□□□□ -1.67
Smc1aQ9CU62 Gm11404-201ENSMUST00000120872 494 ntBASIC4.65□□□□□ -1.67
Smc1aQ9CU62 Gm12486-201ENSMUST00000120887 541 ntBASIC4.65□□□□□ -1.67
Smc1aQ9CU62 Gm13865-201ENSMUST00000120957 865 ntBASIC4.65□□□□□ -1.67
Smc1aQ9CU62 Gm14776-201ENSMUST00000121029 887 ntBASIC4.65□□□□□ -1.67
Smc1aQ9CU62 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Smc1aQ9CU62 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Smc1aQ9CU62 Gm23585-201ENSMUST00000157656 102 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms