Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim11Q99PQ2 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm24265-201ENSMUST00000101833 141 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm23430-201ENSMUST00000122490 314 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm22383-201ENSMUST00000158188 327 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm23069-201ENSMUST00000158240 311 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm21999-201ENSMUST00000165985 387 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm22122-201ENSMUST00000175147 200 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm24407-201ENSMUST00000177864 141 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm27460-201ENSMUST00000184213 100 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm27781-201ENSMUST00000185185 92 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm43355-201ENSMUST00000196541 346 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm43078-201ENSMUST00000197222 168 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm8106-201ENSMUST00000213123 523 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm24037-201ENSMUST00000082871 180 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm23096-201ENSMUST00000083447 107 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 AC121844.2-201ENSMUST00000219067 2066 ntBASIC6.21□□□□□ -1.42
Trim11Q99PQ2 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm18360-201ENSMUST00000173327 1524 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm14731-201ENSMUST00000119216 376 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm25325-201ENSMUST00000122559 86 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm25185-201ENSMUST00000157754 96 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm26372-201ENSMUST00000157831 236 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm16038-201ENSMUST00000159317 193 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm22411-201ENSMUST00000175462 126 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm22002-201ENSMUST00000175622 125 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm27754-201ENSMUST00000183340 126 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Zfp-ps-201ENSMUST00000185025 478 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 AC162387.1-201ENSMUST00000213369 213 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 AC160863.1-201ENSMUST00000218412 317 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm22807-201ENSMUST00000082737 129 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim11Q99PQ2 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Trim11Q99PQ2 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms