Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
Cstf1Q99LC2 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Cstf1Q99LC2 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.74
Cstf1Q99LC2 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Cstf1Q99LC2 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm9043-201ENSMUST00000119677 314 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm12577-201ENSMUST00000119701 574 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm22968-201ENSMUST00000157955 118 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm15795-201ENSMUST00000160969 553 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm15143-201ENSMUST00000178180 714 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm35702-201ENSMUST00000198653 511 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm44389-201ENSMUST00000203795 182 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm44849-201ENSMUST00000207595 484 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cstf1Q99LC2 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.15□□□□□ -1.75
Cstf1Q99LC2 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm22497-201ENSMUST00000104499 131 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm15361-201ENSMUST00000119320 444 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm12978-201ENSMUST00000121250 522 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm14977-201ENSMUST00000121626 812 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm25667-201ENSMUST00000157701 275 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm25839-201ENSMUST00000158921 103 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm22120-201ENSMUST00000175590 70 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm21638-201ENSMUST00000179473 836 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm28263-201ENSMUST00000185884 400 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm37501-201ENSMUST00000192830 691 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm42451-201ENSMUST00000197410 244 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm18429-201ENSMUST00000198707 421 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm43841-201ENSMUST00000199491 586 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm19269-201ENSMUST00000211401 804 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm18116-201ENSMUST00000220920 537 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Mir215-201ENSMUST00000083628 112 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cstf1Q99LC2 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Gm14282-201ENSMUST00000119484 240 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Gm14605-201ENSMUST00000120599 268 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Gm15885-201ENSMUST00000122114 388 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Gm2389-201ENSMUST00000160487 189 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Trbv28-201ENSMUST00000192804 264 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Gm29704-201ENSMUST00000196011 253 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Gm44611-201ENSMUST00000207507 355 ntBASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cstf1Q99LC2 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms