Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Brf1Q8CFK2 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.52□□□□□ -1.53
Brf1Q8CFK2 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm13932-201ENSMUST00000120873 610 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm15111-201ENSMUST00000122142 878 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm29563-201ENSMUST00000187249 496 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm21856-201ENSMUST00000187547 696 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm5734-201ENSMUST00000189787 913 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm21735-201ENSMUST00000190360 696 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm17956-201ENSMUST00000199931 838 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm44118-201ENSMUST00000204665 229 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm8911-201ENSMUST00000213986 652 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 AC123062.1-201ENSMUST00000221287 481 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 AC122465.3-201ENSMUST00000221644 355 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 CT030166.1-201ENSMUST00000222654 357 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 AC139845.2-201ENSMUST00000227504 436 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm23927-201ENSMUST00000082466 215 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.51□□□□□ -1.53
Brf1Q8CFK2 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Mir467h-201ENSMUST00000116759 121 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm22194-201ENSMUST00000116869 95 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm15452-201ENSMUST00000119877 240 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm23885-201ENSMUST00000122682 294 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm24113-201ENSMUST00000157477 276 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm25603-201ENSMUST00000158361 105 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm23025-201ENSMUST00000158769 111 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm3053-201ENSMUST00000161709 616 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm18128-201ENSMUST00000172625 511 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Mir3062-201ENSMUST00000174986 105 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm6214-201ENSMUST00000178845 541 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Mir8118-201ENSMUST00000183962 129 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm37771-201ENSMUST00000193121 265 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm7946-201ENSMUST00000203326 958 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm45392-201ENSMUST00000210441 214 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm17820-201ENSMUST00000220213 1068 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.5□□□□□ -1.53
Brf1Q8CFK2 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Brf1Q8CFK2 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Brf1Q8CFK2 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Brf1Q8CFK2 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Brf1Q8CFK2 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.49□□□□□ -1.53
Brf1Q8CFK2 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Brf1Q8CFK2 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms