Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm24220-201ENSMUST00000177753 79 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm25988-201ENSMUST00000177759 79 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm23471-201ENSMUST00000177886 79 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm26488-201ENSMUST00000178225 79 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm23449-201ENSMUST00000179208 79 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm25221-201ENSMUST00000180051 79 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm27568-201ENSMUST00000184220 99 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm27805-201ENSMUST00000184513 79 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm7041-201ENSMUST00000201227 524 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm6051-201ENSMUST00000201529 352 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm7726-201ENSMUST00000206241 231 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm45081-201ENSMUST00000206281 572 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm5358-201ENSMUST00000212814 353 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 AC122901.2-201ENSMUST00000216926 285 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm6988-201ENSMUST00000222676 375 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.42□□□□□ -1.7
Ccdc40Q8BI79 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm14890-201ENSMUST00000117660 676 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm10444-201ENSMUST00000126708 148 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm4487-201ENSMUST00000150617 442 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm23906-201ENSMUST00000157573 128 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm24224-201ENSMUST00000158828 258 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm16589-201ENSMUST00000159522 918 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm18415-201ENSMUST00000177464 647 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm7094-201ENSMUST00000178379 366 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm27254-201ENSMUST00000183926 517 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm37167-201ENSMUST00000194946 396 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm43774-201ENSMUST00000196327 878 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm4734-201ENSMUST00000200117 777 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm18791-201ENSMUST00000204611 726 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm17987-201ENSMUST00000206902 603 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gm45690-201ENSMUST00000210775 246 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ccdc40Q8BI79 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Ccdc40Q8BI79 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
Ccdc40Q8BI79 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Ccdc40Q8BI79 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.4□□□□□ -1.7
Ccdc40Q8BI79 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm3835-201ENSMUST00000120752 403 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm12087-201ENSMUST00000121878 258 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm23501-201ENSMUST00000157744 256 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm25185-201ENSMUST00000157754 96 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm18128-201ENSMUST00000172625 511 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Mir1264-201ENSMUST00000175381 86 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm27718-201ENSMUST00000183721 86 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm33626-201ENSMUST00000206790 828 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm44849-201ENSMUST00000207595 484 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm6776-201ENSMUST00000057752 900 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Mecom-201ENSMUST00000061088 348 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ccdc40Q8BI79 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms