Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Mir7022-201ENSMUST00000183749 61 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm28560-201ENSMUST00000186091 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm28334-201ENSMUST00000186653 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm28495-201ENSMUST00000188452 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm28232-201ENSMUST00000188683 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm29598-201ENSMUST00000188996 588 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm28481-201ENSMUST00000189231 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm29059-201ENSMUST00000191534 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm37765-201ENSMUST00000192395 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm38046-201ENSMUST00000192733 550 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm37237-201ENSMUST00000192893 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm36968-201ENSMUST00000193737 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm38290-201ENSMUST00000195238 315 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm31931-201ENSMUST00000219666 222 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Olfr881-201ENSMUST00000074611 948 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.69□□□□□ -1.66
Ubfd1Q78JW9 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm12245-201ENSMUST00000117266 357 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm11633-201ENSMUST00000118176 444 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm15022-201ENSMUST00000122074 746 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm14903-201ENSMUST00000122435 537 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm16114-201ENSMUST00000161930 300 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm3084-201ENSMUST00000169967 598 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Mir7028-201ENSMUST00000185016 64 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm23925-202ENSMUST00000188429 132 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm18635-201ENSMUST00000199020 1060 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm4714-201ENSMUST00000203395 279 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm35262-201ENSMUST00000215133 267 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm272-201ENSMUST00000222073 919 ntBASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubfd1Q78JW9 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm12607-201ENSMUST00000120724 493 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm12466-201ENSMUST00000121199 620 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms