Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm12313-201ENSMUST00000121347 421 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm25104-201ENSMUST00000122476 163 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm22398-201ENSMUST00000174941 125 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm25731-201ENSMUST00000175167 125 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm27155-201ENSMUST00000183716 898 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm44354-201ENSMUST00000196017 143 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm43345-201ENSMUST00000199484 269 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm18039-201ENSMUST00000217816 728 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.44□□□□□ -1.7
Herc4Q6PAV2 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm24608-201ENSMUST00000104381 136 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm11673-201ENSMUST00000117846 331 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm11797-201ENSMUST00000121336 754 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm15075-201ENSMUST00000122187 477 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm16373-201ENSMUST00000129517 303 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm24905-201ENSMUST00000158129 104 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm25525-201ENSMUST00000177701 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm26178-201ENSMUST00000177706 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm26465-201ENSMUST00000178517 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm24317-201ENSMUST00000178536 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm25021-201ENSMUST00000179184 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm22995-201ENSMUST00000179670 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm24424-201ENSMUST00000179714 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm24389-201ENSMUST00000179962 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm25672-201ENSMUST00000180111 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Mir6414-201ENSMUST00000183685 82 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm29163-201ENSMUST00000188029 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm17967-201ENSMUST00000195319 647 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm38008-201ENSMUST00000195333 518 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm44371-201ENSMUST00000204148 467 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm19269-201ENSMUST00000211401 804 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm18645-202ENSMUST00000212222 760 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm23815-201ENSMUST00000083231 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm23520-201ENSMUST00000093736 107 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Herc4Q6PAV2 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm11719-201ENSMUST00000119399 351 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm22613-201ENSMUST00000122679 292 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm25150-201ENSMUST00000157121 60 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm25553-201ENSMUST00000158076 79 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms