Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Mir92b-201ENSMUST00000102300 83 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm12931-201ENSMUST00000117046 324 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm13557-201ENSMUST00000120771 382 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm12486-201ENSMUST00000120887 541 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm14649-201ENSMUST00000121814 324 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm6058-201ENSMUST00000154261 399 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm23231-201ENSMUST00000157299 104 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm22726-201ENSMUST00000158089 179 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Mir1251-201ENSMUST00000175486 84 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm6625-201ENSMUST00000177870 272 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm10067-201ENSMUST00000179462 348 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Mir6345-201ENSMUST00000184286 128 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm37416-201ENSMUST00000193596 318 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm4859-201ENSMUST00000199625 787 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm45162-201ENSMUST00000209013 618 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav5d-4Q5R1F6 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.28□□□□□ -1.89
Trav5d-4Q5R1F6 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm11510-201ENSMUST00000120278 347 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm14875-201ENSMUST00000120881 319 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm12900-201ENSMUST00000120919 573 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm22219-201ENSMUST00000157562 319 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm25605-201ENSMUST00000158364 124 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm6486-201ENSMUST00000166202 434 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Mir6943-201ENSMUST00000185186 66 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm45367-201ENSMUST00000210171 347 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm45735-201ENSMUST00000212779 319 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 AC132433.1-201ENSMUST00000221553 1101 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm40598-201ENSMUST00000222953 547 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm7099-201ENSMUST00000080066 554 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm24281-201ENSMUST00000104234 136 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm12884-201ENSMUST00000120371 325 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm16327-201ENSMUST00000137146 228 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm26556-201ENSMUST00000180645 320 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm21070-201ENSMUST00000182425 985 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Mir6963-201ENSMUST00000183535 71 ntBASIC3.26□□□□□ -1.89
Trav5d-4Q5R1F6 Gm28267-201ENSMUST00000191093 265 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms